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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • plastid 3
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G490500.1 Wheat cytosol 55.44 74.44
TraesCS7B01G410500.1 Wheat mitochondrion, plastid 69.79 73.57
HORVU7Hr1G112970.1 Barley cytosol, nucleus 68.13 70.03
TraesCS7D01G490900.1 Wheat mitochondrion 68.43 70.02
KXG29624 Sorghum cytosol 69.03 69.03
TraesCS7B01G410900.1 Wheat cytosol, nucleus, plastid 48.64 68.95
Os06t0652100-00 Rice mitochondrion 65.86 68.02
TraesCS7D01G490400.1 Wheat mitochondrion 68.73 65.28
TraesCS7B01G410400.1 Wheat mitochondrion 68.28 64.48
TraesCS7A01G503000.1 Wheat mitochondrion 66.01 63.7
PGSC0003DMT400094367 Potato cytosol 9.82 61.32
CDX99560 Canola cytosol 12.24 59.56
CDX86854 Canola cytosol 25.83 58.97
GSMUA_AchrUn_... Banana cytosol, plastid 51.51 57.12
VIT_05s0049g00640.t01 Wine grape cytosol 6.95 56.79
CDX69659 Canola cytosol 23.41 56.16
CDY60899 Canola cytosol 25.83 56.07
Solyc01g009540.1.1 Tomato cytosol 7.7 53.68
VIT_01s0146g00440.t01 Wine grape cytosol, mitochondrion 48.79 52.18
HORVU7Hr1G112960.3 Barley nucleus 48.49 51.86
PGSC0003DMT400070342 Potato cytosol 30.82 51.39
OQU84313 Sorghum mitochondrion 51.66 51.27
KRH75085 Soybean cytosol, plastid 49.7 50.93
Solyc09g089940.1.1 Tomato cytosol 48.64 50.55
PGSC0003DMT400044378 Potato cytosol 48.64 50.55
CDY09774 Canola cytosol, plastid 49.4 50.39
PGSC0003DMT400030584 Potato cytosol, plastid 46.53 50.33
CDY22349 Canola plastid 46.22 50.0
EER93519 Sorghum mitochondrion 51.51 49.21
PGSC0003DMT400030583 Potato cytosol, vacuole 7.25 48.98
Bra033679.1-P Field mustard plastid 47.28 48.6
Bra008847.1-P Field mustard nucleus, plastid 48.79 48.5
Bra035287.1-P Field mustard cytosol 43.35 48.4
AT5G43400.1 Thale cress plastid 47.89 48.4
EER88676 Sorghum mitochondrion, plastid 51.51 48.23
AT5G43390.1 Thale cress cytosol, plastid 46.53 47.9
VIT_05s0049g00650.t01 Wine grape cytosol 9.52 47.73
Solyc01g009530.1.1 Tomato cytosol 15.41 47.66
VIT_05s0049g00560.t01 Wine grape cytosol 37.76 47.35
AT5G13210.1 Thale cress cytosol, plastid 48.04 47.25
EES01714 Sorghum plastid 42.6 45.63
CDX69660 Canola plastid 23.26 44.77
KXG37641 Sorghum plastid 41.84 43.97
AT3G24780.1 Thale cress nucleus 45.02 41.68
CDX99561 Canola nucleus, plastid 15.41 32.18
CDX86853 Canola endoplasmic reticulum, extracellular 8.46 30.11
OQU88215 Sorghum cytosol 18.13 30.0
Protein Annotations
EnsemblPlants:EER88742EnsemblPlantsGene:SORBI_3010G211600EntrezGene:8058433InterPro:DUF2828InterPro:IPR036465InterPro:UCP015417_vWA
InterPro:vWFA_dom_sfPANTHER:PTHR31373PANTHER:PTHR31373:SF3PFAM:PF11443PIRSF:PIRSF015417ProteinID:EER88742
ProteinID:EER88742.1RefSeq:XP_002437375.1SEG:segSUPFAM:SSF53300UniParc:UPI0001A88E61UniProt:C5Z750
MapMan:35.2:::::
Description
hypothetical protein
Coordinates
chr10:+:55462045..55464033
Molecular Weight (calculated)
72575.2 Da
IEP (calculated)
9.327
GRAVY (calculated)
-0.216
Length
662 amino acids
Sequence
(BLAST)
001: MATPASRNAV SYTLLGPPAE SLRAASARAA AAAEKAAAAM PTTGDAFLDL MDAEFNKPAP KPTPAPKKAR TENSSPTFVS SGDPCLDFFF HVVPGTPAAS
101: VASLLADAWA AEPSTALRLA CNLRGVRGTG KSDREGFYAA ALWMHGCHPT TLALNAGPVA EFGYLKDLPE ILHRIIHGGV STRTPGKKAR LAALGGFVVR
201: SRDGSHRRFV HNRPESRPRR KGNAPRGAET REARVAAANE RDRKLSADAA VERRKRRAEA AARAVDRYAR DPKYRLLHDC TADLFAKLLA EDLQKLADGK
301: LSDISLAAKW CPSLDSCYDR STLLCEAIAR RLFPKGSAPD LPDDLEDAYY AYRVRERLHK ALVPLRRALK LPEIFISAKA WGDVVYKRVA SVAMKNYKDL
401: FVKRDKERFE SYLADVKSGK AKIAAGALLP HEILASIDSD GVADLQWERM VTDLRALGRL SNCIAVCDVS GSMDGLPMDV CVSLGLLVSE LSGEPWHHRV
501: ITFSSRPQLH QIPDGTLMEK TNFIRRMEWN MNTDLQAVFD KLLHIAVAGK LTPEQMVKRV FVLSDMEFDL ASSRPWETDY EAITRKFTEA GYGAVVPEVV
601: FWNLRDSDSV PVTALQKGVA LVSGFSKNMV KVFLDGDGIV TPRGIMDKAI SGPEYQKLVV FD
Best Arabidopsis Sequence Match ( AT5G13210.1 )
(BLAST)
001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD
Arabidopsis Description
AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.