CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0499500-01	Rice	cytosol	17.39	87.22
EER93519	Sorghum	mitochondrion	85.61	82.4
TraesCS5A01G319700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	49.03	78.61
TraesCS7D01G496700.1	Wheat	cytosol	47.98	72.73
EER88676	Sorghum	mitochondrion, plastid	74.06	69.87
TraesCS5B01G302900.1	Wheat	plastid	71.81	68.14
TraesCS5D01G309300.1	Wheat	plastid	70.91	67.67
TraesCS5A01G302600.1	Wheat	plastid	70.91	67.47
TraesCS6D01G071700.1	Wheat	cytosol	71.81	67.46
TraesCS6B01G098400.1	Wheat	cytosol	71.66	67.32
TraesCS6A01G073400.1	Wheat	cytosol, peroxisome, plastid	56.97	67.14
TraesCS1A01G354300.1	Wheat	cytosol	70.16	66.67
HORVU6Hr1G013080.3	Barley	nucleus, peroxisome	70.31	66.62
TraesCS1B01G367400.1	Wheat	cytosol	70.02	66.52
TraesCS1D01G356100.1	Wheat	cytosol, nucleus, peroxisome	70.02	66.34
TraesCS7B01G417500.1	Wheat	cytosol, plastid	67.02	66.32
TraesCS7D01G394600.1	Wheat	cytosol	69.27	66.28
TraesCS5D01G325700.1	Wheat	cytosol, nucleus, plastid	67.32	64.88
TraesCS7B01G301000.1	Wheat	cytosol	68.07	64.86
TraesCS5B01G319900.1	Wheat	cytosol, nucleus, peroxisome	67.02	64.41
PGSC0003DMT400094367	Potato	cytosol	10.19	64.15
HORVU5Hr1G079390.2	Barley	cytosol, nucleus, plastid	50.37	61.88
TraesCS5B01G320000.1	Wheat	cytosol	68.67	61.81
CDX69659	Canola	cytosol	24.14	58.33
CDX86854	Canola	cytosol	25.04	57.59
HORVU5Hr1G081560.3	Barley	nucleus	59.22	56.19
CDY60899	Canola	cytosol	25.64	56.07
CDX99560	Canola	cytosol	11.39	55.88
VIT_05s0049g00640.t01	Wine grape	cytosol	6.6	54.32
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	49.92	53.8
KXG29624	Sorghum	cytosol	52.47	52.87
Solyc09g089940.1.1	Tomato	cytosol	49.78	52.12
PGSC0003DMT400070342	Potato	cytosol	30.88	51.89
EER88742	Sorghum	plastid	51.27	51.66
PGSC0003DMT400044378	Potato	cytosol	49.33	51.65
KRH75085	Soybean	cytosol, plastid	49.78	51.39
CDY09774	Canola	cytosol, plastid	49.78	51.16
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.5	51.02
Bra008847.1-P	Field mustard	nucleus, plastid	50.52	50.6
PGSC0003DMT400030584	Potato	cytosol, plastid	46.33	50.49
CDY22349	Canola	plastid	46.03	50.16
Solyc01g009540.1.1	Tomato	cytosol	7.05	49.47
VIT_05s0049g00560.t01	Wine grape	cytosol	39.13	49.43
Bra035287.1-P	Field mustard	cytosol	43.93	49.41
Solyc01g009530.1.1	Tomato	cytosol	15.74	49.07
Bra033679.1-P	Field mustard	plastid	46.63	48.29
AT5G13210.1	Thale cress	cytosol, plastid	48.73	48.29
EES01714	Sorghum	plastid	43.93	47.41
AT5G43390.1	Thale cress	cytosol, plastid	45.58	47.28
AT5G43400.1	Thale cress	plastid	46.03	46.87
KXG37641	Sorghum	plastid	43.78	46.35
Zm00001d045614_P001	Maize	mitochondrion	6.15	45.05
VIT_05s0049g00650.t01	Wine grape	cytosol	8.85	44.7
CDX69660	Canola	plastid	22.79	44.19
AT3G24780.1	Thale cress	nucleus	46.18	43.08
OQU88215	Sorghum	cytosol	22.49	37.5
CDX99561	Canola	nucleus, plastid	16.79	35.33
CDX86853	Canola	endoplasmic reticulum, extracellular	7.95	28.49

Protein Annotations

EnsemblPlants:OQU84313	EnsemblPlantsGene:SORBI_3004G031501	EntrezGene:8057517	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA
InterPro:vWFA_dom_sf	PANTHER:PTHR31373	PANTHER:PTHR31373:SF2	PFAM:PF11443	PIRSF:PIRSF015417	ProteinID:OQU84313
ProteinID:OQU84313.1	RefSeq:XP_002453264.1	SEG:seg	SUPFAM:SSF53300	UniParc:UPI0001A85FF3	UniProt:A0A1Z5RKP0
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:2538128..2540736

Molecular Weight (calculated)

73343.8 Da

IEP (calculated)

8.239

GRAVY (calculated)

-0.249

Length

667 amino acids

Sequence
(BLAST)

001: MAAILLGPPV IRGARPSPPP AATAAEAPPA SHPFLDLLDA CFNNEDDAPA AGSDAAKGGP RMARTENNSA TYASSGNPCL DLFFQVVPDT PAQRVRELVT
101: VAWAHDPLTA LKLVANLRGV RGTGKSDREG FYAAALWMHE RHPKTLACNL PALAEFGYLK DFPELLYRLI HGADTRTLYK AKAETQKIRR KVAEARAARL
201: AGKKRAHGES DAPEPKRSSE SGDVVPAAAA AAAPMETEES ATDVAAAKEI PMTKEVRKAA KLAVQSLETY YGNGAYRFLL DCVAQFFADL LASDLEQLAP
301: GGRKTKIGLA AKWCPTPGSS FDRTTLLCEA IARRLFPRDS SPDYSDLSEE HYAYRVLHRL RREVLVPLRK VLELPEVYMS AQRWSELPYT RVASVAMRRY
401: KALFKKHDEA RFDKYLEDVE AGKAKIAAGA VLPHEIAAAA FRGQADDVSE LQWRRMVEDL RKKGSLSNCI AVCDVSGSMN GTPMEVCVAL GLLISELSEK
501: PWAGRVITFS TTPQIHKIEG KTLVEKMSFI ERMDWDMSTN FQAVFDRILR TAVDGRLPKE KMIRTVFVFS DMEFDEASAR PWETDYQAIC RKFNGAGYGD
601: AVPQIVFWNL RDSKSTPVTS TQPGVAMVSG FSKNLVKLFL QNGVVNSEAV MKAAIAGEEY QKLAVFD

Best Arabidopsis Sequence Match ( AT5G13210.1 )
(BLAST)

001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD

Arabidopsis Description

AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.