Factsheet for TraesCS5A01G319700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 1
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus, plastid, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0499500-01	Rice	cytosol	25.96	81.2
TraesCS6A01G073400.1	Wheat	cytosol, peroxisome, plastid	83.17	61.13
PGSC0003DMT400094367	Potato	cytosol	14.66	57.55
TraesCS5D01G325700.1	Wheat	cytosol, nucleus, plastid	94.71	56.94
TraesCS5B01G319900.1	Wheat	cytosol, nucleus, peroxisome	94.23	56.48
CDX86854	Canola	cytosol	38.94	55.86
CDX69659	Canola	cytosol	37.02	55.8
VIT_05s0049g00640.t01	Wine grape	cytosol	10.82	55.56
CDX99560	Canola	cytosol	17.55	53.68
CDY60899	Canola	cytosol	37.98	51.8
TraesCS5B01G320000.1	Wheat	cytosol	91.83	51.55
HORVU5Hr1G081560.3	Barley	nucleus	86.78	51.35
TraesCS1A01G354300.1	Wheat	cytosol	86.54	51.28
TraesCS5A01G302600.1	Wheat	plastid	85.1	50.5
PGSC0003DMT400030583	Potato	cytosol, vacuole	11.78	50.0
OQU84313	Sorghum	mitochondrion	78.61	49.03
PGSC0003DMT400070342	Potato	cytosol	46.15	48.36
Solyc01g009540.1.1	Tomato	cytosol	10.82	47.37
Zm00001d045614_P001	Maize	mitochondrion	10.34	47.25
EER88676	Sorghum	mitochondrion, plastid	79.09	46.53
EER93519	Sorghum	mitochondrion	77.16	46.32
VIT_05s0049g00650.t01	Wine grape	cytosol	13.46	42.42
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	56.25	37.8
TraesCS6A01G148700.1	Wheat	cytosol	57.93	37.54
TraesCS6A01G149200.1	Wheat	cytosol	57.45	36.83
Solyc09g089940.1.1	Tomato	cytosol	55.77	36.42
PGSC0003DMT400044378	Potato	cytosol	55.05	35.95
PGSC0003DMT400030584	Potato	cytosol, plastid	52.4	35.62
CDY09774	Canola	cytosol, plastid	54.81	35.13
CDY22349	Canola	plastid	51.68	35.13
Solyc01g009530.1.1	Tomato	cytosol	18.03	35.05
Bra008847.1-P	Field mustard	nucleus, plastid	55.05	34.38
AT5G43390.1	Thale cress	cytosol, plastid	52.88	34.21
Bra033679.1-P	Field mustard	plastid	52.88	34.16
KRH75085	Soybean	cytosol, plastid	52.4	33.75
AT5G13210.1	Thale cress	cytosol, plastid	53.61	33.14
AT5G43400.1	Thale cress	plastid	51.92	32.98
VIT_05s0049g00560.t01	Wine grape	cytosol	41.59	32.77
Bra035287.1-P	Field mustard	cytosol	45.91	32.21
TraesCS7A01G503000.1	Wheat	mitochondrion	52.88	32.07
TraesCS5A01G302500.1	Wheat	cytosol, plastid	47.84	31.49
AT3G24780.1	Thale cress	nucleus	50.24	29.23
CDX69660	Canola	plastid	13.46	16.28
CDX86853	Canola	endoplasmic reticulum, extracellular	6.49	14.52
CDX99561	Canola	nucleus, plastid	9.38	12.3

Protein Annotations

EnsemblPlants:TraesCS5A01G319700.1	EnsemblPlantsGene:TraesCS5A01G319700	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
PANTHER:PTHR31373	PANTHER:PTHR31373:SF2	PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	SUPFAM:SSF53300
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:532740691..532741963

Molecular Weight (calculated)

46933.8 Da

IEP (calculated)

8.711

GRAVY (calculated)

-0.139

Length

416 amino acids

Sequence
(BLAST)

001: MSKKVWKVAK LAVQSLETYY GDRAYRFLFD AIADFFAALL TSDLEQLAHG GKKMKIGLAA KWCPTPGSSF DRTTLLCEAI ARRLFPRDSD PEYAQLSDEH
101: YTYHALHRLR RQVLVPLRKV LKLPEVYMSA QRWSELPYTR VASVAMRRYK LLFKKHDEVR FGRYLDDVKA GKAKISAGAL LPHEIAAAAL LGQEDDVSEL
201: QWRRMVDDLR AKGSLRNCIS VCDVSASMTG TPMEVCIALG VLASELSEKP WRGKVITFHS RPSIHTIKGN TLWEKMKFVE RLEWGGSTNF QVFDQILRTA
301: VDAGLAPEKM IRTVFVYSDM EFNMASGPSW ETDYEVICEK FRAAGYGDVV PQIVFWNLRD SSSMPVTSTQ PGVAIVSGFS KNILKIFLQN DGVVNPEAIM
401: MQAIAGDEYQ KLAVFD

Best Arabidopsis Sequence Match ( AT3G24780.1 )
(BLAST)

001: MASQFPGPSE IQDSNAPLTS SGPTNPVNTS PPMGQTEERP HTYLAALLKN INTCRPSVPK VSNIKKSTKV NVNPVRPVRP VRPIRPVRPV RPVRPVRRRR
101: VDLNKSSPAM GYTENRSATY LSSGNPCLDF FFHIVPSTPK KSLEQRLEEA WDHDSLTTLK LICNLRGVRG TGKSDKEGFY TAALWLHGRH PKTLACNLES
201: LSKFGYFKDF PEILYRILQG PEIRSIQKTQ RYDTIAAASL RRRSRFSRGG RGFGGGRSRG RHFLKRSAAT RELRVANAER KNQEEKARAS LKRKQKKVSM
301: AKAASTKYSN DPNYRFLHER VSELFANQLK RDLEFLTSGQ PNKISLAAKW CPSLDSSFDK ATLICESIAR KIFPQESFPE YEGVEDAHYA YRVRDRLRKQ
401: VLVPLRKTLQ LPEVYMGARA WQSLPYNRVA SVAMKSYKEV FLYRDEKRFQ QYLNDAKTGK TKIAAGAVLP HEIIRELNGG DGGKVAELQW KRMVDDLKEK
501: GSLTNCMAIC DVSGSMNGEP MEVSVALGLL VSELSEEPWK GKLITFRQSP ELHLVKGDDL RSKTEFVESM QWDMNTDFQK VFDLILKVAV ESKLKPQDMI
601: KRVFVFSDME FDEASTSTSS FNKWRSSPPT PSNRWDTLSY SEDDEDEEND AWQTDYKVIV RKYREKGYGE AVPEIVFWNL RDSRSTPVLG NKKGVALVSG
701: FSKKCSWITM ERLIP

Arabidopsis Description

Uncharacterized conserved protein UCP015417, vWA [Source:UniProtKB/TrEMBL;Acc:Q1PEM2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.