Factsheet for TraesCS6A01G149200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G177100.1	Wheat	cytosol	88.29	90.52
TraesCS6A01G148700.1	Wheat	cytosol	73.19	73.99
KXG29624	Sorghum	cytosol	71.03	69.64
Os02t0179600-01	Rice	extracellular	68.88	68.14
Zm00001d053740_P001	Maize	cytosol	68.41	67.79
TraesCS6D01G138500.1	Wheat	mitochondrion, plastid	34.05	65.58
PGSC0003DMT400094367	Potato	cytosol	10.17	62.26
CDX86854	Canola	cytosol	27.12	60.69
CDX99560	Canola	cytosol	12.17	58.09
CDX69659	Canola	cytosol	24.65	57.97
TraesCS5A01G319700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	36.83	57.45
CDY60899	Canola	cytosol	26.96	57.38
Solyc01g009540.1.1	Tomato	cytosol	8.01	54.74
TraesCS7A01G503000.1	Wheat	mitochondrion	57.78	54.66
VIT_05s0049g00640.t01	Wine grape	cytosol	6.78	54.32
GSMUA_AchrUn_...	Banana	cytosol, plastid	49.15	53.43
PGSC0003DMT400070342	Potato	cytosol	31.43	51.39
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.7	51.02
Solyc09g089940.1.1	Tomato	cytosol	50.08	51.02
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	48.54	50.89
PGSC0003DMT400044378	Potato	cytosol	49.77	50.71
KRH75085	Soybean	cytosol, plastid	50.08	50.31
CDY22349	Canola	plastid	47.0	49.84
Bra033679.1-P	Field mustard	plastid	48.38	48.76
VIT_05s0049g00650.t01	Wine grape	cytosol	9.86	48.48
CDY09774	Canola	cytosol, plastid	48.23	48.23
TraesCS5A01G302600.1	Wheat	plastid	51.62	47.79
Bra035287.1-P	Field mustard	cytosol	43.61	47.72
PGSC0003DMT400030584	Potato	cytosol, plastid	44.84	47.55
AT5G13210.1	Thale cress	cytosol, plastid	49.31	47.55
TraesCS1A01G354300.1	Wheat	cytosol	51.31	47.44
Bra008847.1-P	Field mustard	nucleus, plastid	48.23	47.0
AT5G43400.1	Thale cress	plastid	47.3	46.87
VIT_05s0049g00560.t01	Wine grape	cytosol	37.9	46.59
AT5G43390.1	Thale cress	cytosol, plastid	45.76	46.19
TraesCS6A01G073400.1	Wheat	cytosol, peroxisome, plastid	40.22	46.11
TraesCS5A01G302500.1	Wheat	cytosol, plastid	44.68	45.89
Solyc01g009530.1.1	Tomato	cytosol	15.1	45.79
AT3G24780.1	Thale cress	nucleus	45.61	41.4
CDX69660	Canola	plastid	21.26	40.12
CDX99561	Canola	nucleus, plastid	16.18	33.12
CDX86853	Canola	endoplasmic reticulum, extracellular	8.01	27.96

Protein Annotations

EnsemblPlants:TraesCS6A01G149200.1	EnsemblPlantsGene:TraesCS6A01G149200	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
PANTHER:PTHR31373	PANTHER:PTHR31373:SF3	PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	SUPFAM:SSF53300
TIGR:cd00198	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:131228679..131230628

Molecular Weight (calculated)

71501.3 Da

IEP (calculated)

10.158

GRAVY (calculated)

-0.169

Length

649 amino acids

Sequence
(BLAST)

001: MVDYRLLGPP EARHAAMITV AAPTDEAFSY PKHCNVKKES GALGPAGKTR TKKRSPTFPS SGDPCLDFFR VLPATPAATV ARLLAAAWAA DPSTALRLVA
101: NLRGVRGSGK SDRESFYAAA LWLHARHPAT LARNAASVAT FGYLKDLPEL LHRIVRGGVS NKAERRTALL ATGRRGPFGL GRCRDSLGRT RNFRKRRPRP
201: KVDRAARVGT AEERLAAKLR HDRELSAAAA VSRRSKRVDT AATAIRRYFC DPTYRLLHDR TADLFASLLV EDMRKLANGD VRELSLAAKW CPSLGSSYDR
301: STLLCEAVAR RLFPRGSSLE LTDDLLDGHY AYRARERLRR TVLVPLRRTL QLPEVFMSAR AWESVVYTRV ASVAMKNYQA VFLKHDAERF NAYLADVKSG
401: KKRIAAGALL PHQIIESLGE DGDGAGTGVA DMQWRRMVDD MRALGKLANC VAVCDVSGSM SGLPMDVCVA LGLLVSELTD DPWRGRVITF SERPEIHLIT
501: GDTLSEKVSF VRAMEWGMNT NFQAVFDKIL DVAVAAGLPP ERMVRRVLVF SDMEFDQASA HPWETDYEAI VRKFSEAGYG SAVPEIVFWN LAYSKAVPVM
601: SGQQGVALVS GFSKNLLKLF LDGGGIVTPR TIMEKAIVGP EYDKLTVFD

Best Arabidopsis Sequence Match ( AT3G24780.1 )
(BLAST)

001: MASQFPGPSE IQDSNAPLTS SGPTNPVNTS PPMGQTEERP HTYLAALLKN INTCRPSVPK VSNIKKSTKV NVNPVRPVRP VRPIRPVRPV RPVRPVRRRR
101: VDLNKSSPAM GYTENRSATY LSSGNPCLDF FFHIVPSTPK KSLEQRLEEA WDHDSLTTLK LICNLRGVRG TGKSDKEGFY TAALWLHGRH PKTLACNLES
201: LSKFGYFKDF PEILYRILQG PEIRSIQKTQ RYDTIAAASL RRRSRFSRGG RGFGGGRSRG RHFLKRSAAT RELRVANAER KNQEEKARAS LKRKQKKVSM
301: AKAASTKYSN DPNYRFLHER VSELFANQLK RDLEFLTSGQ PNKISLAAKW CPSLDSSFDK ATLICESIAR KIFPQESFPE YEGVEDAHYA YRVRDRLRKQ
401: VLVPLRKTLQ LPEVYMGARA WQSLPYNRVA SVAMKSYKEV FLYRDEKRFQ QYLNDAKTGK TKIAAGAVLP HEIIRELNGG DGGKVAELQW KRMVDDLKEK
501: GSLTNCMAIC DVSGSMNGEP MEVSVALGLL VSELSEEPWK GKLITFRQSP ELHLVKGDDL RSKTEFVESM QWDMNTDFQK VFDLILKVAV ESKLKPQDMI
601: KRVFVFSDME FDEASTSTSS FNKWRSSPPT PSNRWDTLSY SEDDEDEEND AWQTDYKVIV RKYREKGYGE AVPEIVFWNL RDSRSTPVLG NKKGVALVSG
701: FSKKCSWITM ERLIP

Arabidopsis Description

Uncharacterized conserved protein UCP015417, vWA [Source:UniProtKB/TrEMBL;Acc:Q1PEM2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.