CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053740_P001	Maize	cytosol	82.02	82.9
TraesCS6D01G138100.1	Wheat	cytosol, nucleus, peroxisome, plastid	74.17	77.08
TraesCS6A01G148700.1	Wheat	cytosol	74.47	76.79
HORVU6Hr1G029540.1	Barley	cytosol, nucleus, peroxisome	75.53	76.57
TraesCS6B01G176900.1	Wheat	cytosol, nucleus, peroxisome, plastid	74.62	76.23
Os02t0179600-01	Rice	extracellular	74.17	74.85
TraesCS6B01G177100.1	Wheat	cytosol	69.03	72.2
TraesCS6A01G149200.1	Wheat	cytosol	69.64	71.03
EER88742	Sorghum	plastid	69.03	69.03
PGSC0003DMT400094367	Potato	cytosol	10.27	64.15
CDX86854	Canola	cytosol	26.74	61.03
CDX69659	Canola	cytosol	25.23	60.51
CDY60899	Canola	cytosol	27.34	59.34
CDX99560	Canola	cytosol	11.93	58.09
VIT_05s0049g00640.t01	Wine grape	cytosol	7.1	58.02
GSMUA_AchrUn_...	Banana	cytosol, plastid	51.21	56.78
TraesCS6D01G138500.1	Wheat	mitochondrion, plastid	28.55	56.08
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	50.76	54.28
Solyc01g009540.1.1	Tomato	cytosol	7.7	53.68
Solyc09g089940.1.1	Tomato	cytosol	51.36	53.38
PGSC0003DMT400044378	Potato	cytosol	51.36	53.38
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.85	53.06
PGSC0003DMT400070342	Potato	cytosol	31.72	52.9
OQU84313	Sorghum	mitochondrion	52.87	52.47
KRH75085	Soybean	cytosol, plastid	51.06	52.32
CDY22349	Canola	plastid	47.73	51.63
PGSC0003DMT400030584	Potato	cytosol, plastid	47.13	50.98
EER88676	Sorghum	mitochondrion, plastid	53.93	50.49
Bra033679.1-P	Field mustard	plastid	48.79	50.16
CDY09774	Canola	cytosol, plastid	49.09	50.08
EER93519	Sorghum	mitochondrion	51.96	49.64
Bra035287.1-P	Field mustard	cytosol	44.26	49.41
VIT_05s0049g00650.t01	Wine grape	cytosol	9.82	49.24
AT5G43400.1	Thale cress	plastid	48.49	49.01
AT5G13210.1	Thale cress	cytosol, plastid	49.7	48.89
Bra008847.1-P	Field mustard	nucleus, plastid	49.09	48.8
Solyc01g009530.1.1	Tomato	cytosol	15.71	48.6
VIT_05s0049g00560.t01	Wine grape	cytosol	38.67	48.48
AT5G43390.1	Thale cress	cytosol, plastid	46.37	47.74
EES01714	Sorghum	plastid	42.45	45.47
KXG37641	Sorghum	plastid	42.3	44.44
AT3G24780.1	Thale cress	nucleus	46.22	42.8
CDX69660	Canola	plastid	21.75	41.86
CDX99561	Canola	nucleus, plastid	15.26	31.86
OQU88215	Sorghum	cytosol	18.88	31.25
CDX86853	Canola	endoplasmic reticulum, extracellular	7.85	27.96

Protein Annotations

EnsemblPlants:KXG29624	EnsemblPlantsGene:SORBI_3004G064900	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
PANTHER:PTHR31373	PANTHER:PTHR31373:SF3	PFAM:PF11443	PIRSF:PIRSF015417	ProteinID:KXG29624	ProteinID:KXG29624.1
SEG:seg	SUPFAM:SSF53300	UniParc:UPI0007F30190	UniProt:A0A194YN27	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr4:-:5230103..5232091

Molecular Weight (calculated)

71543.5 Da

IEP (calculated)

8.376

GRAVY (calculated)

-0.128

Length

662 amino acids

Sequence
(BLAST)

001: MAIAVGTAAD ASYTLVGPPE ARQRHAGARS EAAPTGEDFP DLMDTCFNKP TAPVPAAAVG PGGKALTENL SPTFISSGDP CLDFFFHVVP GTPAASVESL
101: LGAAWAADPT TALCLVANLR GVRGSGKSDR EGFYAAALWL HARHPRTLAL NAAPIADFGY LKDLPELLHR IVHGGVSTRT PGKKARLAAE GGGFVGGRGR
201: GRGRRFFGSR TPRTRVEREN SARVGSTEER VAASLEHDRG LAAAAAVARR TRRAEAAARA VEMYSNDPTY RFLHDRTADL FAGLIAEDMR KLADGKLREF
301: SLAAKWCPSL DSSYDRSTLL CEAVARRLFP KGSAPELAAD LADEHYAYRA RERLRRVALV PLRRALKLPE VFISARAWES VAYTRVASVA MKNYKDLFLK
401: HDADRFSAYL ADVKSGKKRI AAGALLPHEI IASLGDGDEG GVADLQWQRM VDDMRALGKL SNCVAVCDVS GSMTGLPMDV CVALGLLVSE LSDDPWRGRV
501: ITFSEHPELH KIAGETLSEK TSFVQTMDWG MNTNFQAVFD KILEVAVGAR LAPERMVRRV FVFSDMEFDQ ASANPWETDY EAIVRKFTEA GYGAAVPEVV
601: FWNLRDSKAV PVEAGQKGVA LVSGFSKNLL KLFLDGGGIV SPRAVMEKAI AGPEYGKLAV FD

Best Arabidopsis Sequence Match ( AT5G13210.1 )
(BLAST)

001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD

Arabidopsis Description

AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.