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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • nucleus 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86854 Canola cytosol 47.55 97.24
PGSC0003DMT400030583 Potato cytosol, vacuole 11.8 71.43
Bra008847.1-P Field mustard nucleus, plastid 73.19 65.17
AT5G13210.1 Thale cress cytosol, plastid 70.83 62.41
Os09t0499500-01 Rice cytosol 13.66 60.9
PGSC0003DMT400030584 Potato cytosol, plastid 57.17 55.39
AT3G24780.1 Thale cress nucleus 64.92 53.85
Solyc01g009540.1.1 Tomato cytosol 8.6 53.68
KRH75085 Soybean cytosol, plastid 56.83 52.17
Bra033679.1-P Field mustard plastid 52.95 48.76
GSMUA_AchrUn_... Banana cytosol, plastid 47.89 47.57
TraesCS5A01G319700.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole 32.21 45.91
TraesCS6D01G138100.1 Wheat cytosol, nucleus, peroxisome, plastid 49.24 45.84
Zm00001d053740_P001 Maize cytosol 50.42 45.65
TraesCS6B01G176900.1 Wheat cytosol, nucleus, peroxisome, plastid 49.41 45.22
Solyc01g009530.1.1 Tomato cytosol 16.19 44.86
TraesCS7D01G490500.1 Wheat cytosol 37.27 44.83
Os02t0179600-01 Rice extracellular 49.58 44.82
TraesCS6A01G148700.1 Wheat cytosol 48.4 44.7
TraesCS7B01G410900.1 Wheat cytosol, nucleus, plastid 35.08 44.54
KXG29624 Sorghum cytosol 49.41 44.26
HORVU6Hr1G029540.1 Barley cytosol, nucleus, peroxisome 48.57 44.1
TraesCS7B01G410500.1 Wheat mitochondrion, plastid 46.54 43.95
OQU84313 Sorghum mitochondrion 49.41 43.93
TraesCS7D01G496700.1 Wheat cytosol 32.38 43.64
TraesCS6A01G149200.1 Wheat cytosol 47.72 43.61
EER88742 Sorghum plastid 48.4 43.35
TraesCS6B01G177100.1 Wheat cytosol 46.21 43.29
Os06t0652100-00 Rice mitochondrion 46.21 42.75
TraesCS5A01G302600.1 Wheat plastid 50.25 42.51
HORVU7Hr1G112970.1 Barley cytosol, nucleus 46.04 42.39
TraesCS7D01G490900.1 Wheat mitochondrion 46.04 42.19
TraesCS1D01G356100.1 Wheat cytosol, nucleus, peroxisome 50.08 42.19
TraesCS1A01G354300.1 Wheat cytosol 49.92 42.17
HORVU6Hr1G013080.3 Barley nucleus, peroxisome 49.92 42.05
TraesCS1B01G367400.1 Wheat cytosol 49.75 42.02
TraesCS7B01G417500.1 Wheat cytosol, plastid 47.72 41.99
TraesCS5B01G302900.1 Wheat plastid 49.75 41.96
TraesCS5D01G309300.1 Wheat plastid 49.41 41.92
EER93519 Sorghum mitochondrion 48.9 41.85
TraesCS6D01G138500.1 Wheat mitochondrion, plastid 23.78 41.84
VIT_05s0049g00650.t01 Wine grape cytosol 9.27 41.67
TraesCS6B01G098400.1 Wheat cytosol 49.75 41.55
TraesCS6D01G071700.1 Wheat cytosol 49.75 41.55
EER88676 Sorghum mitochondrion, plastid 48.9 41.02
TraesCS7D01G394600.1 Wheat cytosol 48.06 40.89
TraesCS7B01G301000.1 Wheat cytosol 47.89 40.57
TraesCS6A01G073400.1 Wheat cytosol, peroxisome, plastid 38.45 40.28
TraesCS5D01G325700.1 Wheat cytosol, nucleus, plastid 46.54 39.88
TraesCS5B01G319900.1 Wheat cytosol, nucleus, peroxisome 46.37 39.63
TraesCS7A01G503000.1 Wheat mitochondrion 44.86 38.78
TraesCS7B01G410400.1 Wheat mitochondrion 44.86 37.95
TraesCS7D01G490400.1 Wheat mitochondrion 44.52 37.88
TraesCS5B01G320000.1 Wheat cytosol 47.22 37.79
Os09t0499400-01 Rice vacuole 36.76 36.7
EES01714 Sorghum plastid 38.11 36.57
TraesCS3D01G541900.1 Wheat mitochondrion 30.35 36.36
TraesCS5B01G302800.1 Wheat cytosol, plastid 38.11 35.99
TraesCS5A01G302500.1 Wheat cytosol, plastid 38.28 35.92
HORVU5Hr1G079390.2 Barley cytosol, nucleus, plastid 32.72 35.73
TraesCS5D01G309200.1 Wheat plastid 37.94 35.71
TraesCS3B01G607400.1 Wheat cytosol 38.79 35.6
KXG37641 Sorghum plastid 36.76 34.6
HORVU5Hr1G081560.3 Barley nucleus 40.13 33.85
HORVU5Hr1G079400.3 Barley cytosol, nucleus, plastid 34.57 32.8
HORVU7Hr1G112960.3 Barley nucleus 33.05 31.66
HORVU3Hr1G117270.1 Barley cytosol 16.53 30.06
Os12t0141800-01 Rice cytosol, mitochondrion, peroxisome, plastid 8.94 28.96
OQU88215 Sorghum cytosol 14.84 22.0
Zm00001d045614_P001 Maize mitochondrion 2.53 16.48
Protein Annotations
EnsemblPlants:Bra035287.1EnsemblPlants:Bra035287.1-PEnsemblPlantsGene:Bra035287InterPro:DUF2828InterPro:IPR036465InterPro:UCP015417_vWA
InterPro:vWFA_dom_sfPANTHER:PTHR31373PFAM:PF11443PIRSF:PIRSF015417SEG:segSUPFAM:SSF53300
UniParc:UPI0002546EC8UniProt:M4F2I8MapMan:35.2:::
Description
AT3G24780 (E=8e-087) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterized conserved protein UCP015417, vWA (InterPro:IPR011205), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13210.1); Has 276 Blast hits to 231 proteins in 34 species: Archae - 0; Bacteria - 26; Metazoa - 5; Fungi - 23; Plants - 46; Viruses - 15; Other Eukaryotes - 161 (source: NCBI BLink).
Coordinates
chrA08:+:9895562..9897441
Molecular Weight (calculated)
66619.8 Da
IEP (calculated)
9.082
GRAVY (calculated)
-0.427
Length
593 amino acids
Sequence
(BLAST)
001: MASRLLGPPE LRDSKPLLQK PITASGPRNP FIDLMVENFN YSIKLKDPSS PQKGLTENGA GTYLSAGNPC LDFFFHVVPS TPKKSLEERL QLAWDHDPLT
101: TLKLICNLRG VRGTGKSDKE GFYTAALWLH GSHPKTLACN LESLSKFGYF KDFAEILYRI LKGSKIRDTQ KSERMQGKSC RGRGRRVHGS RKRKMAATRE
201: LRVATAEMKN QADKAIASIN RKLEKISMGK EAFTRYSHDA EYRFLHERVS DLFSDLLRRD VEFLTSGETN KISLAAKWRR GSLTTLQLPE VYMGAKAWGS
301: LPYNRVASVA MKSYKEIFLS HDEERFKKYL EDAKSGKTKI AAGALLPHEI IGDLEGGDGG QVAELQWKRM VDDMRTKGWL TNCIAISDVS GSMEGTPMEV
401: SVALGLVVSE LAEEPWRGKL ITFSGTPELH LVEGDDLRSK TQFVRDMDWG ANTDFQKVFD LILKVAVEGT LKPEEMIRRV FVFSDMEFDE ASSSSHSRYN
501: RSETSSWETN YQVIVSKYKE KGYGGVVPEI VFWNLRDSKS TPVARSDKGV ALVSGFSKNL IKMFLDNDGD IDPMTIMHAV ISGPEYNELV VID
Best Arabidopsis Sequence Match ( AT5G13210.1 )
(BLAST)
001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD
Arabidopsis Description
AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.