Factsheet for TraesCS6D01G071700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
mitochondrion 1
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	secretory
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G098400.1	Wheat	cytosol	96.9	96.9
TraesCS6A01G073400.1	Wheat	cytosol, peroxisome, plastid	77.18	96.82
HORVU6Hr1G013080.3	Barley	nucleus, peroxisome	89.15	89.91
TraesCS1D01G356100.1	Wheat	cytosol, nucleus, peroxisome	81.83	82.53
TraesCS5D01G309300.1	Wheat	plastid	80.56	81.83
Os09t0499500-01	Rice	cytosol	15.07	80.45
TraesCS7D01G496700.1	Wheat	cytosol	48.73	78.64
TraesCS5D01G325700.1	Wheat	cytosol, nucleus, plastid	74.79	76.73
TraesCS7D01G394600.1	Wheat	cytosol	74.08	75.47
OQU84313	Sorghum	mitochondrion	67.46	71.81
EER93519	Sorghum	mitochondrion	66.9	68.54
EER88676	Sorghum	mitochondrion, plastid	67.61	67.89
CDX86854	Canola	cytosol	23.94	58.62
VIT_05s0049g00640.t01	Wine grape	cytosol	6.48	56.79
PGSC0003DMT400094367	Potato	cytosol	8.45	56.6
CDX69659	Canola	cytosol	21.69	55.8
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	47.04	53.96
CDX99560	Canola	cytosol	10.28	53.68
CDY60899	Canola	cytosol	22.54	52.46
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.18	52.04
Solyc09g089940.1.1	Tomato	cytosol	46.62	51.96
TraesCS6D01G138100.1	Wheat	cytosol, nucleus, peroxisome, plastid	46.48	51.81
PGSC0003DMT400044378	Potato	cytosol	45.77	51.02
Solyc01g009530.1.1	Tomato	cytosol	15.35	50.93
PGSC0003DMT400070342	Potato	cytosol	28.31	50.63
TraesCS7D01G490500.1	Wheat	cytosol	34.93	50.3
CDY09774	Canola	cytosol, plastid	45.92	50.23
PGSC0003DMT400030584	Potato	cytosol, plastid	43.1	50.0
Bra008847.1-P	Field mustard	nucleus, plastid	46.9	50.0
TraesCS7D01G490900.1	Wheat	mitochondrion	45.35	49.77
Bra035287.1-P	Field mustard	cytosol	41.55	49.75
AT5G13210.1	Thale cress	cytosol, plastid	46.9	49.48
VIT_05s0049g00560.t01	Wine grape	cytosol	36.34	48.86
KRH75085	Soybean	cytosol, plastid	44.23	48.61
CDY22349	Canola	plastid	41.83	48.53
Zm00001d045614_P001	Maize	mitochondrion	6.2	48.35
Bra033679.1-P	Field mustard	plastid	43.24	47.67
TraesCS3D01G541900.1	Wheat	mitochondrion	32.25	46.26
AT5G43390.1	Thale cress	cytosol, plastid	41.69	46.03
AT5G43400.1	Thale cress	plastid	42.25	45.8
TraesCS7D01G490400.1	Wheat	mitochondrion	44.37	45.19
TraesCS5D01G309200.1	Wheat	plastid	40.0	45.08
Solyc01g009540.1.1	Tomato	cytosol	5.92	44.21
CDX69660	Canola	plastid	20.99	43.31
AT3G24780.1	Thale cress	nucleus	43.38	43.08
TraesCS6D01G138500.1	Wheat	mitochondrion, plastid	19.86	41.84
VIT_05s0049g00650.t01	Wine grape	cytosol	7.61	40.91
CDX99561	Canola	nucleus, plastid	15.35	34.38
CDX86853	Canola	endoplasmic reticulum, extracellular	7.18	27.42

Protein Annotations

EnsemblPlants:TraesCS6D01G071700.1	EnsemblPlantsGene:TraesCS6D01G071700	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
PANTHER:PTHR31373	PANTHER:PTHR31373:SF2	PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	SUPFAM:SSF53300
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:36252567..36255427

Molecular Weight (calculated)

78597.3 Da

IEP (calculated)

9.395

GRAVY (calculated)

-0.290

Length

710 amino acids

Sequence
(BLAST)

001: MATETEPAAA AAPCLLLGPP LIRAARPSPA TAAAASADTD ASHPFLDLLD AAFNAPSAEE IKAALKPRRA LTENCSATYA NSGNPCLDFF FQVVPDTPPE
101: RVRSLLAAAW THDALTALKL ACNLRGVRGT GKSDKEGFYA AALWMHENHP RTLACNVAAL AEFGYLKDFP ELLFRLIHGA DVRKVAKAGV EDEKVRRKAK
201: ALAQQREGLR ARLAGRKRAR ELAPEPAKAT FSDFLSAALS KFGKGKPVEV ETAPVAVEEP KPEAMEVDAE KTANKPRRMS KKVRKVAKLA VQSLETYYGD
301: RAYRFLFDAV AEFFAALLAS DLEQLAPKGK KRKIGLAAKW CPTPGSSFDR TTLLCEAIAR RLFPRDSEPE LAQLSDDHYT YQAIRRLRRE VLVPLRKVLE
401: LPEVYMSAQR WSELPYNRVA SVAMRRYKFL FKKHDEARFD KYLEDVEEGK AKISAGALLP HEIAAAAYRG EDDNVSELQW RRMVDDLRSK GSLRNCISVC
501: DVSGSMNGTP MEVCVALGVL TSELSEEPWA GKVITFSSTP EIHLIKGKTL AKKMAFVKRM QWNMSTNFQA VFDQILRTAV NARLAPEKMI RTVFVYSDME
601: FNKASGHGGG GYYGYGSRRS SGSWDTDYNV ICKKFRDAGY GDVVPQIIFW NLRDSKSTPV TSTQPGVAMV SGFSKNFLKI FLQNDGVVNP EAIMMQAIAG
701: DEYQKLTVYD

Best Arabidopsis Sequence Match ( AT3G24780.1 )
(BLAST)

001: MASQFPGPSE IQDSNAPLTS SGPTNPVNTS PPMGQTEERP HTYLAALLKN INTCRPSVPK VSNIKKSTKV NVNPVRPVRP VRPIRPVRPV RPVRPVRRRR
101: VDLNKSSPAM GYTENRSATY LSSGNPCLDF FFHIVPSTPK KSLEQRLEEA WDHDSLTTLK LICNLRGVRG TGKSDKEGFY TAALWLHGRH PKTLACNLES
201: LSKFGYFKDF PEILYRILQG PEIRSIQKTQ RYDTIAAASL RRRSRFSRGG RGFGGGRSRG RHFLKRSAAT RELRVANAER KNQEEKARAS LKRKQKKVSM
301: AKAASTKYSN DPNYRFLHER VSELFANQLK RDLEFLTSGQ PNKISLAAKW CPSLDSSFDK ATLICESIAR KIFPQESFPE YEGVEDAHYA YRVRDRLRKQ
401: VLVPLRKTLQ LPEVYMGARA WQSLPYNRVA SVAMKSYKEV FLYRDEKRFQ QYLNDAKTGK TKIAAGAVLP HEIIRELNGG DGGKVAELQW KRMVDDLKEK
501: GSLTNCMAIC DVSGSMNGEP MEVSVALGLL VSELSEEPWK GKLITFRQSP ELHLVKGDDL RSKTEFVESM QWDMNTDFQK VFDLILKVAV ESKLKPQDMI
601: KRVFVFSDME FDEASTSTSS FNKWRSSPPT PSNRWDTLSY SEDDEDEEND AWQTDYKVIV RKYREKGYGE AVPEIVFWNL RDSRSTPVLG NKKGVALVSG
701: FSKKCSWITM ERLIP

Arabidopsis Description

Uncharacterized conserved protein UCP015417, vWA [Source:UniProtKB/TrEMBL;Acc:Q1PEM2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.