Factsheet for TraesCS3D01G541900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G607400.1	Wheat	cytosol	93.13	71.36
TraesCS5D01G309200.1	Wheat	plastid	83.43	65.56
Os09t0499400-01	Rice	vacuole	67.88	56.57
KXG37641	Sorghum	plastid	68.08	53.49
EES01714	Sorghum	plastid	65.66	52.59
TraesCS7D01G496700.1	Wheat	cytosol	40.61	45.68
PGSC0003DMT400094367	Potato	cytosol	9.49	44.34
PGSC0003DMT400070342	Potato	cytosol	35.56	44.33
CDY60899	Canola	cytosol	27.07	43.93
VIT_05s0049g00640.t01	Wine grape	cytosol	7.07	43.21
Solyc01g009540.1.1	Tomato	cytosol	8.28	43.16
PGSC0003DMT400030583	Potato	cytosol, vacuole	8.48	42.86
CDX86854	Canola	cytosol	25.05	42.76
CDX99560	Canola	cytosol	11.72	42.65
TraesCS7D01G490500.1	Wheat	cytosol	42.02	42.19
CDX69659	Canola	cytosol	22.83	40.94
TraesCS6D01G138100.1	Wheat	cytosol, nucleus, peroxisome, plastid	46.87	36.42
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	45.45	36.35
CDY22349	Canola	plastid	44.85	36.27
PGSC0003DMT400044378	Potato	cytosol	46.67	36.26
Solyc09g089940.1.1	Tomato	cytosol	46.46	36.11
PGSC0003DMT400030584	Potato	cytosol, plastid	43.64	35.29
HORVU3Hr1G117270.1	Barley	cytosol	23.03	34.97
VIT_05s0049g00650.t01	Wine grape	cytosol	9.29	34.85
AT5G43390.1	Thale cress	cytosol, plastid	45.05	34.68
CDY09774	Canola	cytosol, plastid	45.05	34.36
KRH75085	Soybean	cytosol, plastid	44.65	34.21
AT5G43400.1	Thale cress	plastid	45.25	34.2
Bra033679.1-P	Field mustard	plastid	44.44	34.16
TraesCS7D01G490900.1	Wheat	mitochondrion	44.44	34.0
TraesCS7D01G394600.1	Wheat	cytosol	47.27	33.57
Bra008847.1-P	Field mustard	nucleus, plastid	45.05	33.48
TraesCS5D01G309300.1	Wheat	plastid	47.27	33.48
TraesCS5D01G325700.1	Wheat	cytosol, nucleus, plastid	46.26	33.09
TraesCS1D01G356100.1	Wheat	cytosol, nucleus, peroxisome	46.26	32.53
TraesCS6D01G071700.1	Wheat	cytosol	46.26	32.25
AT5G13210.1	Thale cress	cytosol, plastid	43.84	32.24
TraesCS6D01G138500.1	Wheat	mitochondrion, plastid	21.82	32.05
VIT_05s0049g00560.t01	Wine grape	cytosol	33.94	31.82
Solyc01g009530.1.1	Tomato	cytosol	13.13	30.37
Bra035287.1-P	Field mustard	cytosol	36.36	30.35
TraesCS7D01G490400.1	Wheat	mitochondrion	42.42	30.13
AT3G24780.1	Thale cress	nucleus	41.62	28.81
CDX86853	Canola	endoplasmic reticulum, extracellular	9.9	26.34
CDX69660	Canola	plastid	17.78	25.58
CDX99561	Canola	nucleus, plastid	12.73	19.87

Protein Annotations

EnsemblPlants:TraesCS3D01G541900.1	EnsemblPlantsGene:TraesCS3D01G541900	InterPro:DUF2828	InterPro:UCP015417_vWA	PANTHER:PTHR31373	PANTHER:PTHR31373:SF9
PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr3D:+:613057364..613058851

Molecular Weight (calculated)

53976.7 Da

IEP (calculated)

8.884

GRAVY (calculated)

-0.203

Length

495 amino acids

Sequence
(BLAST)

001: MHANHPRTLA ANLGGFARFG CLKDLPEILY RVLHGPRDER KDQDDVAAAA IQYRRGGPGG KGGKRRCVGG GRAAAAETAK ARREKEAEHA QAVLARYDSD
101: EAFRKLYDGV ADLFAGLLKS DLEHLRAGET AKIGLAAKWC PSLRSSYDRA TLLCEAIARR VFPRDSSPEY LAIPDKHYAY RVRSRLRREV QVPLRKVLEL
201: PEVYMSARKW DELPYARVAS TAMRQYKEAF EKHDKEGVAG FYDEVRAGLS KIPADAVLPH VIVAAALKGE HDESAELQWR HMVSSLASEG RLTNCIAMCA
301: LSGTSDKPPA AAAIALGLLI SELSQDPWKG RVITFDATHQ LHKVRGASLV EKLRPLAAVT PQRGANLQAV FNKILKVAVA GELAKDQMVR RVFVLSDMEF
401: DGWTGGEAWV SEHEAIRKRF AAEGFAAPEV VFWNVGGTSK AASPVVAAQA GVALVSGYSK NLVRLFLEAD GVLTPSAIMA DAISGPEYDA LEVLD

Best Arabidopsis Sequence Match ( AT3G24780.1 )
(BLAST)

001: MASQFPGPSE IQDSNAPLTS SGPTNPVNTS PPMGQTEERP HTYLAALLKN INTCRPSVPK VSNIKKSTKV NVNPVRPVRP VRPIRPVRPV RPVRPVRRRR
101: VDLNKSSPAM GYTENRSATY LSSGNPCLDF FFHIVPSTPK KSLEQRLEEA WDHDSLTTLK LICNLRGVRG TGKSDKEGFY TAALWLHGRH PKTLACNLES
201: LSKFGYFKDF PEILYRILQG PEIRSIQKTQ RYDTIAAASL RRRSRFSRGG RGFGGGRSRG RHFLKRSAAT RELRVANAER KNQEEKARAS LKRKQKKVSM
301: AKAASTKYSN DPNYRFLHER VSELFANQLK RDLEFLTSGQ PNKISLAAKW CPSLDSSFDK ATLICESIAR KIFPQESFPE YEGVEDAHYA YRVRDRLRKQ
401: VLVPLRKTLQ LPEVYMGARA WQSLPYNRVA SVAMKSYKEV FLYRDEKRFQ QYLNDAKTGK TKIAAGAVLP HEIIRELNGG DGGKVAELQW KRMVDDLKEK
501: GSLTNCMAIC DVSGSMNGEP MEVSVALGLL VSELSEEPWK GKLITFRQSP ELHLVKGDDL RSKTEFVESM QWDMNTDFQK VFDLILKVAV ESKLKPQDMI
601: KRVFVFSDME FDEASTSTSS FNKWRSSPPT PSNRWDTLSY SEDDEDEEND AWQTDYKVIV RKYREKGYGE AVPEIVFWNL RDSRSTPVLG NKKGVALVSG
701: FSKKCSWITM ERLIP

Arabidopsis Description

Uncharacterized conserved protein UCP015417, vWA [Source:UniProtKB/TrEMBL;Acc:Q1PEM2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.