CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 3
extracellular 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84313	Sorghum	mitochondrion	82.4	85.61
Os09t0499500-01	Rice	cytosol	16.16	84.21
TraesCS5A01G319700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	46.32	77.16
EER88676	Sorghum	mitochondrion, plastid	73.45	71.99
TraesCS7D01G496700.1	Wheat	cytosol	45.31	71.36
TraesCS6A01G073400.1	Wheat	cytosol, peroxisome, plastid	54.98	67.31
TraesCS5D01G309300.1	Wheat	plastid	67.53	66.95
TraesCS6D01G071700.1	Wheat	cytosol	68.54	66.9
TraesCS5B01G302900.1	Wheat	plastid	67.82	66.86
TraesCS5A01G302600.1	Wheat	plastid	67.39	66.62
TraesCS6B01G098400.1	Wheat	cytosol	68.11	66.48
TraesCS7D01G394600.1	Wheat	cytosol	66.38	66.0
TraesCS1B01G367400.1	Wheat	cytosol	66.81	65.95
TraesCS1A01G354300.1	Wheat	cytosol	66.81	65.95
TraesCS1D01G356100.1	Wheat	cytosol, nucleus, peroxisome	66.81	65.77
HORVU6Hr1G013080.3	Barley	nucleus, peroxisome	66.52	65.48
PGSC0003DMT400094367	Potato	cytosol	9.96	65.09
TraesCS7B01G301000.1	Wheat	cytosol	65.22	64.57
TraesCS5B01G319900.1	Wheat	cytosol, nucleus, peroxisome	64.36	64.27
TraesCS7B01G417500.1	Wheat	cytosol, plastid	62.48	64.24
TraesCS5D01G325700.1	Wheat	cytosol, nucleus, plastid	63.92	64.02
HORVU5Hr1G079390.2	Barley	cytosol, nucleus, plastid	47.91	61.14
TraesCS5B01G320000.1	Wheat	cytosol	65.22	61.0
CDX69659	Canola	cytosol	22.94	57.61
VIT_05s0049g00640.t01	Wine grape	cytosol	6.64	56.79
CDX86854	Canola	cytosol	23.67	56.55
CDY60899	Canola	cytosol	24.53	55.74
HORVU5Hr1G081560.3	Barley	nucleus	55.41	54.62
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	48.77	54.6
CDX99560	Canola	cytosol	10.68	54.41
Solyc09g089940.1.1	Tomato	cytosol	48.63	52.9
Solyc01g009540.1.1	Tomato	cytosol	7.22	52.63
KXG29624	Sorghum	cytosol	49.64	51.96
PGSC0003DMT400070342	Potato	cytosol	29.73	51.89
PGSC0003DMT400044378	Potato	cytosol	47.62	51.81
EER88742	Sorghum	plastid	49.21	51.51
PGSC0003DMT400030584	Potato	cytosol, plastid	45.45	51.47
CDY09774	Canola	cytosol, plastid	48.05	51.31
KRH75085	Soybean	cytosol, plastid	47.76	51.24
Bra008847.1-P	Field mustard	nucleus, plastid	48.2	50.15
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.07	50.0
CDY22349	Canola	plastid	44.01	49.84
VIT_05s0049g00560.t01	Wine grape	cytosol	37.81	49.62
Bra035287.1-P	Field mustard	cytosol	41.85	48.9
Solyc01g009530.1.1	Tomato	cytosol	15.01	48.6
AT5G13210.1	Thale cress	cytosol, plastid	47.04	48.44
Bra033679.1-P	Field mustard	plastid	44.44	47.83
AT5G43400.1	Thale cress	plastid	44.88	47.48
EES01714	Sorghum	plastid	42.28	47.41
AT5G43390.1	Thale cress	cytosol, plastid	43.87	47.28
CDX69660	Canola	plastid	22.8	45.93
KXG37641	Sorghum	plastid	41.7	45.87
Zm00001d045614_P001	Maize	mitochondrion	5.92	45.05
VIT_05s0049g00650.t01	Wine grape	cytosol	8.51	44.7
AT3G24780.1	Thale cress	nucleus	43.43	42.1
OQU88215	Sorghum	cytosol	21.64	37.5
CDX99561	Canola	nucleus, plastid	16.59	36.28
CDX86853	Canola	endoplasmic reticulum, extracellular	7.22	26.88

Protein Annotations

EnsemblPlants:EER93519	EnsemblPlantsGene:SORBI_3001G103500	EntrezGene:8059954	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA
InterPro:vWFA_dom_sf	PANTHER:PTHR31373	PANTHER:PTHR31373:SF2	PFAM:PF11443	PIRSF:PIRSF015417	ProteinID:EER93519
ProteinID:EER93519.1	RefSeq:XP_002466521.1	SEG:seg	SUPFAM:SSF53300	UniParc:UPI0001A8276A	UniProt:C5WLZ3
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:7949328..7951671

Molecular Weight (calculated)

76406.7 Da

IEP (calculated)

9.077

GRAVY (calculated)

-0.251

Length

693 amino acids

Sequence
(BLAST)

001: MAAVLLGPPV IRGARPPPPP PTATAAEGPA SHPFLDLLDV CFNNDDPPAG SDAANGGKGP RMARTENNSA TYASSGNPCL DLFFQVVPDT PAQRVRELVT
101: IAWAHDPLTA LKLIANLRGV RGTGKSDREG FYAAALWMHE RHPKTLACNL PALAEFGYLK DFPELLYRLI HGADTRKLYK AKAETQKIRR KVAEVRAARL
201: AEKKRAHSQS AAPQHTAGAP VLADFVSAAL SNPRTKAKRS SESGAVVPAA APMETEEAAV ENKPEAVDVA ATKEIPMTKE VRKVAKLAVQ SLETYYGNGA
301: YRFLFDCVAQ FFADLLASDL EQLAPGGRKT KIGLAAKWCP TPGSSFDRTT LLCEAIARRL FPRDSRPDYS DLSEEHYAYR VLHRLRREVL VPLRKVLELP
401: EVYMSAQRWS DLPYTRVASV AMRRYKALFK KHDEARFDKY LEDVEAGKAK IAAGALLPHE IAAAAFRGEA DDVSELQWRR MVEDLRKKGS LSNCIAVCDV
501: SGSMSGTPME VCVALGLLIS DLSEMPWAGR VITFSMTPQI HKIEGKTLAQ KMSFIKRMQW NMNTNFQAVF DRILRTAVDG RVTKDKMIRT VFVFSDMEFD
601: QASARPWETD YQAICRKFSD AGYGDAVPQI VFWNLRDSKS TPVTSTQPGV AMVSGFSKNL VKLFLENDGV VNSEAVMKAA IAGEEYQKLA VFD

Best Arabidopsis Sequence Match ( AT5G13210.1 )
(BLAST)

001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD

Arabidopsis Description

AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.