Factsheet for TraesCS6A01G148700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G138100.1	Wheat	cytosol, nucleus, peroxisome, plastid	92.06	92.78
TraesCS6B01G176900.1	Wheat	cytosol, nucleus, peroxisome, plastid	93.3	92.44
HORVU6Hr1G029540.1	Barley	cytosol, nucleus, peroxisome	88.63	87.14
Os02t0179600-01	Rice	extracellular	76.95	75.3
Zm00001d053740_P001	Maize	cytosol	76.64	75.11
KXG29624	Sorghum	cytosol	76.79	74.47
TraesCS6A01G149200.1	Wheat	cytosol	73.99	73.19
PGSC0003DMT400094367	Potato	cytosol	10.59	64.15
CDX86854	Canola	cytosol	26.95	59.66
TraesCS7A01G503000.1	Wheat	mitochondrion	62.93	58.89
CDX99560	Canola	cytosol	12.46	58.82
CDX69659	Canola	cytosol	25.23	58.7
TraesCS5A01G319700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	37.54	57.93
CDY60899	Canola	cytosol	27.41	57.7
Solyc01g009540.1.1	Tomato	cytosol	8.26	55.79
GSMUA_AchrUn_...	Banana	cytosol, plastid	51.4	55.28
VIT_05s0049g00640.t01	Wine grape	cytosol	6.85	54.32
Solyc09g089940.1.1	Tomato	cytosol	53.27	53.69
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	51.25	53.15
PGSC0003DMT400044378	Potato	cytosol	52.65	53.06
KRH75085	Soybean	cytosol, plastid	52.65	52.32
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.94	52.04
PGSC0003DMT400070342	Potato	cytosol	31.78	51.39
CDY22349	Canola	plastid	48.75	51.14
CDY09774	Canola	cytosol, plastid	50.78	50.23
PGSC0003DMT400030584	Potato	cytosol, plastid	47.82	50.16
Bra008847.1-P	Field mustard	nucleus, plastid	50.62	48.8
Bra033679.1-P	Field mustard	plastid	48.91	48.76
VIT_05s0049g00560.t01	Wine grape	cytosol	39.88	48.48
VIT_05s0049g00650.t01	Wine grape	cytosol	9.97	48.48
Bra035287.1-P	Field mustard	cytosol	44.7	48.4
AT5G13210.1	Thale cress	cytosol, plastid	50.62	48.29
TraesCS5A01G302600.1	Wheat	plastid	52.65	48.22
AT5G43390.1	Thale cress	cytosol, plastid	48.13	48.06
TraesCS1A01G354300.1	Wheat	cytosol	52.34	47.86
AT5G43400.1	Thale cress	plastid	48.75	47.79
Solyc01g009530.1.1	Tomato	cytosol	15.58	46.73
TraesCS5A01G302500.1	Wheat	cytosol, plastid	45.48	46.2
TraesCS6A01G073400.1	Wheat	cytosol, peroxisome, plastid	39.41	44.7
CDX69660	Canola	plastid	23.21	43.31
AT3G24780.1	Thale cress	nucleus	47.66	42.8
CDX99561	Canola	nucleus, plastid	15.58	31.55
CDX86853	Canola	endoplasmic reticulum, extracellular	8.57	29.57

Protein Annotations

EnsemblPlants:TraesCS6A01G148700.1	EnsemblPlantsGene:TraesCS6A01G148700	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
PANTHER:PTHR31373	PANTHER:PTHR31373:SF3	PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	SUPFAM:SSF53300
TIGR:cd00198	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:129938258..129940186

Molecular Weight (calculated)

69320.5 Da

IEP (calculated)

7.099

GRAVY (calculated)

-0.148

Length

642 amino acids

Sequence
(BLAST)

001: MAGFPLVGPP EAATAAGAAV PTGDAFVDLL DASFNKATET GGTGKALTEN SSPTFVSSGD PCLDFFFHVV PGTPAASVAS LLAAAWAADP VTALRLVANL
101: RGVRGSGKSD REGFYAAALW LHARHPATLA RNAASVAAFG YLKDLPELLH RIVHGGKSTR TPGKKARLEA EGGGFVGRGR GRGRWSGGSS GRKPRSEDRA
201: PPVGSSEERT AASLERDREL AAAAAVSRRA KRAEAAARAL EMYSRDSTYR FLHDRTADLF AELLAEDMRK LSVGNVKDFS LAAKWCPSLD SSYDRSTLLC
301: EAIARRLFPR GSSSELGDDL PDAHYAYRAR EHLRRAAIVP LRAALKLPEV FISARAWESV VYTRVASVAM KNYKDLFLKH DAERFNAYLA DVKSGKKRIA
401: AGALLPHQII ESLGEDGDDG GLADLQWQRM VDDMRALGKL NSCVAVCDVS GSMSGLPMDV CIALGLLVSE LTDDPWRGRV ITFSEQPNIH MIKGDTLSEK
501: TEFVRNMDWG MNTDFQAVFD KILEVAVGAG LPAEKMVQRV FVFSDMEFDQ ASANPWETDY EAIVRKFSEA GYGAAVPEIV FWNLRDSKAV PVMSGQKGVA
601: LVSGFSKNLL KLFLDGGGTF TPRVVMEKAI AGPEYDQLAV FD

Best Arabidopsis Sequence Match ( AT3G24780.1 )
(BLAST)

001: MASQFPGPSE IQDSNAPLTS SGPTNPVNTS PPMGQTEERP HTYLAALLKN INTCRPSVPK VSNIKKSTKV NVNPVRPVRP VRPIRPVRPV RPVRPVRRRR
101: VDLNKSSPAM GYTENRSATY LSSGNPCLDF FFHIVPSTPK KSLEQRLEEA WDHDSLTTLK LICNLRGVRG TGKSDKEGFY TAALWLHGRH PKTLACNLES
201: LSKFGYFKDF PEILYRILQG PEIRSIQKTQ RYDTIAAASL RRRSRFSRGG RGFGGGRSRG RHFLKRSAAT RELRVANAER KNQEEKARAS LKRKQKKVSM
301: AKAASTKYSN DPNYRFLHER VSELFANQLK RDLEFLTSGQ PNKISLAAKW CPSLDSSFDK ATLICESIAR KIFPQESFPE YEGVEDAHYA YRVRDRLRKQ
401: VLVPLRKTLQ LPEVYMGARA WQSLPYNRVA SVAMKSYKEV FLYRDEKRFQ QYLNDAKTGK TKIAAGAVLP HEIIRELNGG DGGKVAELQW KRMVDDLKEK
501: GSLTNCMAIC DVSGSMNGEP MEVSVALGLL VSELSEEPWK GKLITFRQSP ELHLVKGDDL RSKTEFVESM QWDMNTDFQK VFDLILKVAV ESKLKPQDMI
601: KRVFVFSDME FDEASTSTSS FNKWRSSPPT PSNRWDTLSY SEDDEDEEND AWQTDYKVIV RKYREKGYGE AVPEIVFWNL RDSRSTPVLG NKKGVALVSG
701: FSKKCSWITM ERLIP

Arabidopsis Description

Uncharacterized conserved protein UCP015417, vWA [Source:UniProtKB/TrEMBL;Acc:Q1PEM2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.