Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- extracellular 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002402_P001 | Maize | cytosol, nucleus, plastid | 82.1 | 79.61 |
| KXG27059 | Sorghum | cytosol, nucleus, plastid | 81.53 | 79.06 |
| Zm00001d002399_P001 | Maize | nucleus | 54.83 | 76.89 |
| TraesCS2D01G430800.1 | Wheat | cytosol, nucleus, plastid | 78.41 | 76.24 |
| TraesCS2B01G454100.1 | Wheat | cytosol, nucleus, plastid | 78.41 | 76.24 |
| TraesCS2A01G432800.1 | Wheat | cytosol, nucleus, plastid | 78.41 | 75.62 |
| HORVU2Hr1G101090.6 | Barley | plastid | 79.55 | 66.35 |
| VIT_11s0052g00390.t01 | Wine grape | cytosol | 56.82 | 64.94 |
| GSMUA_AchrUn_... | Banana | nucleus | 62.22 | 64.41 |
| GSMUA_Achr1P23570_001 | Banana | nucleus | 61.36 | 62.97 |
| KRH37361 | Soybean | cytosol | 57.95 | 57.46 |
| KRH02753 | Soybean | cytosol | 57.67 | 56.39 |
| KRH12356 | Soybean | cytosol | 56.82 | 55.1 |
| Solyc12g017480.1.1 | Tomato | cytosol | 56.82 | 54.95 |
| PGSC0003DMT400016538 | Potato | mitochondrion | 56.53 | 54.82 |
| CDY30187 | Canola | nucleus | 40.62 | 51.25 |
| CDX82667 | Canola | nucleus, plastid | 55.68 | 51.04 |
| CDY39144 | Canola | nucleus, plastid | 55.68 | 51.04 |
| Bra038857.1-P | Field mustard | nucleus, plastid | 55.68 | 51.04 |
| Bra024119.1-P | Field mustard | cytosol | 52.84 | 50.82 |
| AT2G19330.1 | Thale cress | nucleus, plastid | 54.83 | 50.79 |
| AT4G26050.1 | Thale cress | cytosol | 54.83 | 50.39 |
| CDY42760 | Canola | cytosol, plastid | 56.25 | 50.13 |
| Bra019126.1-P | Field mustard | cytosol, plastid | 56.25 | 50.13 |
| CDY46713 | Canola | nucleus | 51.99 | 50.0 |
| AT4G29880.1 | Thale cress | nucleus | 52.56 | 49.6 |
| Bra013944.1-P | Field mustard | cytosol, plastid | 55.4 | 48.99 |
| CDX89369 | Canola | cytosol, plastid | 55.4 | 48.99 |
| CDX94383 | Canola | cytosol | 55.11 | 48.74 |
| CDX92748 | Canola | cytosol, plasma membrane, plastid | 51.7 | 48.66 |
| Os02t0593600-01 | Rice | plasma membrane | 34.09 | 23.95 |
| Os10t0572300-01 | Rice | plasma membrane | 30.11 | 19.52 |
| Os08t0511700-00 | Rice | plasma membrane | 31.25 | 19.16 |
| Os02t0826600-01 | Rice | cytosol | 23.58 | 14.16 |
| Os03t0212200-01 | Rice | plasma membrane | 5.68 | 14.08 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:4336911 | EMBL:AK061732 | EMBL:AK066546 | EMBL:AK104574 |
| ProteinID:BAF15708.1 | ProteinID:BAS90882.1 | ProteinID:CAE03882.2 | ProteinID:EAZ31902.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp |
| EnsemblPlantsGene:Os04g0605300 | EnsemblPlants:Os04t0605300-01 | PFAM:PF13855 | PRINTS:PR00019 | PFscan:PS51450 | PANTHER:PTHR44997 |
| UniProt:Q7XNY1 | SMART:SM00364 | SMART:SM00369 | SUPFAM:SSF52058 | UniParc:UPI00001B1A5F | RefSeq:XP_015636867.1 |
| SEG:seg | : | : | : | : | : |
Description
intracellular Ras-group-related LRR protein 1Leucine-rich repeat, typical subtype containing protein. (Os04t0605300-01);Leucine-rich repeat, typical subtype containing protein. (Os04t0605300-02)
Coordinates
chr4:-:30553037..30558393
Molecular Weight (calculated)
39016.4 Da
IEP (calculated)
9.630
GRAVY (calculated)
-0.280
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MREMGEKRRR GHLNPAGFAG GLHDHEEKKN EEHKLDMSGM SMDALPHLTM SLGQVTILDL SNNNLESIPE SIIARLLNVV VLDVRSNQLK SLPNSIGCLS
101: KLKVLNVSGN LLESLPNTIE ECRALEELHA NFNELTKLPD TLGFELHSLR KLSVNSNKLA QLPSSTSHMT ALRALDARLN CLRALPDGLE NLANLEALNV
201: SQNFQFLREL PYAVGLLASL RELDVSYNSI AALPDSMGCL TKLARFSAVG NPLVSPPMDV VEQGLDAMRA YLTARMNGGD GKRKKKAWLP KLVKYSTFTA
301: RMTPGRTRVH ENTEGLLMSD YRSLNGIASP RFLTMLSPRR LFSPRRNSPK HC
101: KLKVLNVSGN LLESLPNTIE ECRALEELHA NFNELTKLPD TLGFELHSLR KLSVNSNKLA QLPSSTSHMT ALRALDARLN CLRALPDGLE NLANLEALNV
201: SQNFQFLREL PYAVGLLASL RELDVSYNSI AALPDSMGCL TKLARFSAVG NPLVSPPMDV VEQGLDAMRA YLTARMNGGD GKRKKKAWLP KLVKYSTFTA
301: RMTPGRTRVH ENTEGLLMSD YRSLNGIASP RFLTMLSPRR LFSPRRNSPK HC
001: MICEEAYHQQ PQIQKEQMMT MDQRNNHQRK RSPLSSPSSP SSPSSPSSPK SPSFNNNEEE RLEVVNLSGM ALESLPNPSL NLAQICKLDL SNNHLQTIPE
101: SLTARLLNLI ALDVHSNQIK ALPNSIGCLS KLKTLNVSGN FLVSFPKSIQ HCRSLEELNA NFNKLIRLPD SIGFELTNLR KLSINSNKLI SLPISITHLT
201: SLRVLDARLN CLMILPDDLE NLINLEILNV SQNFQYLSAL PSSIGLLMNL IELDVSYNKI TVLPESIGCM RRLRKLSVEG NPLVSPPIEV MEQNLQVVRE
301: YLTQKMNGGS PRSPSKKKSW GFGKLVKYGT FNGGSRSWNR EEREGFIMPE YRSIDSLASP RYSGMFSPRR LFSPRTYFSR
101: SLTARLLNLI ALDVHSNQIK ALPNSIGCLS KLKTLNVSGN FLVSFPKSIQ HCRSLEELNA NFNKLIRLPD SIGFELTNLR KLSINSNKLI SLPISITHLT
201: SLRVLDARLN CLMILPDDLE NLINLEILNV SQNFQYLSAL PSSIGLLMNL IELDVSYNKI TVLPESIGCM RRLRKLSVEG NPLVSPPIEV MEQNLQVVRE
301: YLTQKMNGGS PRSPSKKKSW GFGKLVKYGT FNGGSRSWNR EEREGFIMPE YRSIDSLASP RYSGMFSPRR LFSPRTYFSR
Arabidopsis Description
PIRL6Plant intracellular Ras-group-related LRR protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O64566]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.