Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH02753 | Soybean | cytosol | 77.27 | 66.11 |
| GSMUA_AchrUn_... | Banana | nucleus | 70.13 | 63.53 |
| KRH37361 | Soybean | cytosol | 72.4 | 62.82 |
| GSMUA_Achr1P23570_001 | Banana | nucleus | 69.48 | 62.39 |
| PGSC0003DMT400016538 | Potato | mitochondrion | 72.08 | 61.16 |
| KRH12356 | Soybean | cytosol | 72.08 | 61.16 |
| Solyc12g017480.1.1 | Tomato | cytosol | 70.45 | 59.62 |
| Bra024119.1-P | Field mustard | cytosol | 68.83 | 57.92 |
| AT2G19330.1 | Thale cress | nucleus, plastid | 71.43 | 57.89 |
| CDY30187 | Canola | nucleus | 51.95 | 57.35 |
| CDX82667 | Canola | nucleus, plastid | 71.1 | 57.03 |
| CDY39144 | Canola | nucleus, plastid | 71.1 | 57.03 |
| Bra038857.1-P | Field mustard | nucleus, plastid | 71.1 | 57.03 |
| Zm00001d002399_P001 | Maize | nucleus | 46.43 | 56.97 |
| Os04t0605300-01 | Rice | nucleus | 64.94 | 56.82 |
| CDY46713 | Canola | nucleus | 67.21 | 56.56 |
| AT4G26050.1 | Thale cress | cytosol | 69.16 | 55.61 |
| CDY42760 | Canola | cytosol, plastid | 71.1 | 55.44 |
| Bra019126.1-P | Field mustard | cytosol, plastid | 71.1 | 55.44 |
| AT4G29880.1 | Thale cress | nucleus | 66.88 | 55.23 |
| Zm00001d002402_P001 | Maize | cytosol, nucleus, plastid | 64.94 | 55.1 |
| Bra013944.1-P | Field mustard | cytosol, plastid | 71.1 | 55.03 |
| KXG27059 | Sorghum | cytosol, nucleus, plastid | 64.61 | 54.82 |
| CDX89369 | Canola | cytosol, plastid | 70.78 | 54.77 |
| CDX92748 | Canola | cytosol, plasma membrane, plastid | 66.23 | 54.55 |
| CDX94383 | Canola | cytosol | 70.45 | 54.52 |
| TraesCS2D01G430800.1 | Wheat | cytosol, nucleus, plastid | 62.66 | 53.31 |
| TraesCS2A01G432800.1 | Wheat | cytosol, nucleus, plastid | 62.99 | 53.15 |
| TraesCS2B01G454100.1 | Wheat | cytosol, nucleus, plastid | 62.34 | 53.04 |
| HORVU2Hr1G101090.6 | Barley | plastid | 63.64 | 46.45 |
| VIT_17s0000g09230.t01 | Wine grape | cytosol | 37.66 | 25.84 |
| VIT_02s0012g01010.t01 | Wine grape | cytosol | 33.12 | 19.14 |
| VIT_07s0031g02310.t01 | Wine grape | cytosol | 34.09 | 18.85 |
| VIT_17s0000g06940.t01 | Wine grape | cytosol | 15.26 | 18.01 |
| VIT_06s0004g07050.t01 | Wine grape | cytosol, plastid | 16.88 | 13.68 |
| VIT_19s0014g03000.t01 | Wine grape | cytosol, mitochondrion | 25.32 | 13.36 |
Protein Annotations
| EntrezGene:100259795 | wikigene:100259795 | Gene3D:3.80.10.10 | MapMan:35.1 | EMBL:AM427321 | ProteinID:CAN71340 |
| ProteinID:CAN71340.1 | ProteinID:CBI17882 | ProteinID:CBI17882.3 | UniProt:D7SQF1 | EMBL:FN594964 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR032675 | EntrezGene:LOC100259795 | wikigene:LOC100259795 |
| InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF13855 | PFscan:PS51450 | PANTHER:PTHR44997 |
| SMART:SM00364 | SMART:SM00369 | SUPFAM:SSF52058 | UniParc:UPI00015CBF88 | ArrayExpress:VIT_11s0052g00390 | EnsemblPlantsGene:VIT_11s0052g00390 |
| EnsemblPlants:VIT_11s0052g00390.t01 | RefSeq:XP_002266645 | RefSeq:XP_002266645.2 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr11:+:17725666..17728589
Molecular Weight (calculated)
34397.0 Da
IEP (calculated)
8.725
GRAVY (calculated)
-0.141
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLDALPNPS LNLAAICKLD LCNNNLQNIP ESLTARLLNV VILDVHSNQL KSLPNSIGCL SKLKVLNISG NLIQNLPKTI ENCRSLEELN ANFNQLTMLP
101: DTIGFELLNI KKLSVNSNKL MLLPSSTSHL TSLQVLDARL NCLRALPEDL ENLINLQVLN VSQNFQYLET LPYSIGLLMS LVELDASYNR ITTLPDSMGC
201: LKKLQKLCVE GNPLVSPPME VVEQGMQAVK EYLSEKMTAA HRCSPKKKSW IGKLVRYGTF NGTNNASREE REGFLRSDYR SIEGLATPRS VGMFSPRRLF
301: SPRNYFSK
101: DTIGFELLNI KKLSVNSNKL MLLPSSTSHL TSLQVLDARL NCLRALPEDL ENLINLQVLN VSQNFQYLET LPYSIGLLMS LVELDASYNR ITTLPDSMGC
201: LKKLQKLCVE GNPLVSPPME VVEQGMQAVK EYLSEKMTAA HRCSPKKKSW IGKLVRYGTF NGTNNASREE REGFLRSDYR SIEGLATPRS VGMFSPRRLF
301: SPRNYFSK
001: MICEEAYHQQ PQIQKEQMMT MDQRNNHQRK RSPLSSPSSP SSPSSPSSPK SPSFNNNEEE RLEVVNLSGM ALESLPNPSL NLAQICKLDL SNNHLQTIPE
101: SLTARLLNLI ALDVHSNQIK ALPNSIGCLS KLKTLNVSGN FLVSFPKSIQ HCRSLEELNA NFNKLIRLPD SIGFELTNLR KLSINSNKLI SLPISITHLT
201: SLRVLDARLN CLMILPDDLE NLINLEILNV SQNFQYLSAL PSSIGLLMNL IELDVSYNKI TVLPESIGCM RRLRKLSVEG NPLVSPPIEV MEQNLQVVRE
301: YLTQKMNGGS PRSPSKKKSW GFGKLVKYGT FNGGSRSWNR EEREGFIMPE YRSIDSLASP RYSGMFSPRR LFSPRTYFSR
101: SLTARLLNLI ALDVHSNQIK ALPNSIGCLS KLKTLNVSGN FLVSFPKSIQ HCRSLEELNA NFNKLIRLPD SIGFELTNLR KLSINSNKLI SLPISITHLT
201: SLRVLDARLN CLMILPDDLE NLINLEILNV SQNFQYLSAL PSSIGLLMNL IELDVSYNKI TVLPESIGCM RRLRKLSVEG NPLVSPPIEV MEQNLQVVRE
301: YLTQKMNGGS PRSPSKKKSW GFGKLVKYGT FNGGSRSWNR EEREGFIMPE YRSIDSLASP RYSGMFSPRR LFSPRTYFSR
Arabidopsis Description
PIRL6Plant intracellular Ras-group-related LRR protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O64566]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.