Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013944.1-P | Field mustard | cytosol, plastid | 98.24 | 98.24 |
| CDX89369 | Canola | cytosol, plastid | 97.99 | 97.99 |
| CDY42760 | Canola | cytosol, plastid | 89.45 | 90.13 |
| AT4G26050.1 | Thale cress | cytosol | 84.17 | 87.47 |
| CDX92748 | Canola | cytosol, plasma membrane, plastid | 80.4 | 85.56 |
| VIT_11s0052g00390.t01 | Wine grape | cytosol | 54.52 | 70.45 |
| KRH02753 | Soybean | cytosol | 55.53 | 61.39 |
| CDY30187 | Canola | nucleus | 42.46 | 60.57 |
| KRH37361 | Soybean | cytosol | 53.52 | 60.0 |
| PGSC0003DMT400016538 | Potato | mitochondrion | 54.52 | 59.78 |
| GSMUA_Achr1P23570_001 | Banana | nucleus | 50.75 | 58.89 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.25 | 58.82 |
| Solyc12g017480.1.1 | Tomato | cytosol | 53.27 | 58.24 |
| KRH12356 | Soybean | cytosol | 52.26 | 57.3 |
| CDY46713 | Canola | nucleus | 52.26 | 56.83 |
| CDX82667 | Canola | nucleus, plastid | 53.77 | 55.73 |
| CDY39144 | Canola | nucleus, plastid | 53.77 | 55.73 |
| Os04t0605300-01 | Rice | nucleus | 48.74 | 55.11 |
| TraesCS2D01G430800.1 | Wheat | cytosol, nucleus, plastid | 49.25 | 54.14 |
| TraesCS2B01G454100.1 | Wheat | cytosol, nucleus, plastid | 48.99 | 53.87 |
| TraesCS2A01G432800.1 | Wheat | cytosol, nucleus, plastid | 49.25 | 53.7 |
| Zm00001d002399_P001 | Maize | nucleus | 33.67 | 53.39 |
| Zm00001d002402_P001 | Maize | cytosol, nucleus, plastid | 48.24 | 52.89 |
| KXG27059 | Sorghum | cytosol, nucleus, plastid | 47.99 | 52.62 |
| HORVU2Hr1G101090.6 | Barley | plastid | 50.25 | 47.39 |
| CDX73881 | Canola | cytosol | 32.16 | 29.77 |
| CDY00732 | Canola | cytosol | 31.66 | 29.3 |
| CDX72539 | Canola | nucleus | 26.88 | 27.23 |
| CDX70122 | Canola | cytosol | 32.91 | 27.12 |
| CDX98871 | Canola | cytosol | 32.91 | 27.12 |
| CDY01012 | Canola | plastid | 32.41 | 26.99 |
| CDY08535 | Canola | plastid | 32.41 | 25.96 |
| CDY26604 | Canola | cytosol | 29.4 | 25.27 |
| CDY16042 | Canola | cytosol | 29.15 | 25.05 |
| CDY48988 | Canola | cytosol | 27.89 | 23.47 |
| CDX81078 | Canola | mitochondrion | 15.33 | 23.28 |
| CDY40770 | Canola | cytosol | 15.33 | 23.11 |
| CDY69629 | Canola | cytosol | 19.6 | 22.94 |
| CDX78316 | Canola | cytosol, mitochondrion, nucleus | 15.08 | 22.9 |
| CDY14024 | Canola | mitochondrion | 15.08 | 22.81 |
| CDY66405 | Canola | cytosol | 26.88 | 21.4 |
| CDY07843 | Canola | nucleus | 26.38 | 21.0 |
| CDX69142 | Canola | cytosol | 28.64 | 20.96 |
| CDX75505 | Canola | cytosol | 27.89 | 20.56 |
| CDY30364 | Canola | cytosol | 25.38 | 19.77 |
| CDY40632 | Canola | nucleus | 26.63 | 19.45 |
| CDY26809 | Canola | nucleus | 25.38 | 18.91 |
| CDY29703 | Canola | cytosol | 15.08 | 16.53 |
| CDX97851 | Canola | cytosol | 14.82 | 16.25 |
| CDX97667 | Canola | nucleus | 23.12 | 15.73 |
| CDY56828 | Canola | nucleus | 22.36 | 15.21 |
Protein Annotations
| EnsemblPlants:CDX94383 | EnsemblPlantsGene:GSBRNA2T00157502001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PANTHER:PTHR44997 |
| PFAM:PF13855 | PFscan:PS51450 | ProteinID:CDX94383 | ProteinID:CDX94383.1 | SEG:seg | SMART:SM00364 |
| SMART:SM00369 | SUPFAM:SSF52058 | UniParc:UPI0004EDBC08 | MapMan:35.1 | : | : |
Description
BnaC01g18010D
Coordinates
chrLK031881:-:612588..617208
Molecular Weight (calculated)
43891.2 Da
IEP (calculated)
10.231
GRAVY (calculated)
-0.299
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGYEHMNQM TMKTTGMMKN FNKVGPINIP RKKTTRRSVS AIDGGAAATA AAAGEGDRPQ DLKTLDLSRM SLASLSASSI NLASISKFDL SNNNIQQIPE
101: SLVARMLNLW KLDLHSNQLK TLPNSIGCLS KLKVLNVSGN NLQALPKTIE DCRSLEELNA NFNELTTLPD TIGFELTNLT KLSVNSNKLI VLPSSLGHLT
201: SLRVLDARLN HLGSLPEDLE NLVNLQVLNV SQNFQHLKTL PYSVGLLISL VELDVSYNGI KVLPDSIGCL RKIQKLSVEG NPLVSPPFEV VENGLEAVKQ
301: YMSEKMTESN KKTPTKKKLW GIGKMVKFKT FHGLSSSPGR SPGRRTGGER HGDEREGFIN VSDYRQIDGI ASPRHVSLFN PRRLLSPLSA YFSPPRYR
101: SLVARMLNLW KLDLHSNQLK TLPNSIGCLS KLKVLNVSGN NLQALPKTIE DCRSLEELNA NFNELTTLPD TIGFELTNLT KLSVNSNKLI VLPSSLGHLT
201: SLRVLDARLN HLGSLPEDLE NLVNLQVLNV SQNFQHLKTL PYSVGLLISL VELDVSYNGI KVLPDSIGCL RKIQKLSVEG NPLVSPPFEV VENGLEAVKQ
301: YMSEKMTESN KKTPTKKKLW GIGKMVKFKT FHGLSSSPGR SPGRRTGGER HGDEREGFIN VSDYRQIDGI ASPRHVSLFN PRRLLSPLSA YFSPPRYR
001: MMGYEQMNQM TMTTTAMMKN YNKKGLINTP QKKMTRRSVS AIDGGAAATA KEGDRRQNIK TLDLSGMSLA SLSASSINLA SISKLDLSNN NIQKIPESLV
101: ARMLNLWALD LQSNQLKTLP NSIGCLSKLK FLNVSGNYLQ SLPKTIEDCR SLEELNANFN ELTRLPDAIG FELTNLTKLS VNSNKLVLLP NSVSYLTSLR
201: VLDARLNRLS SLPEDLENLV NLQVLNVSQN FQHLTTLPYS VGLLISLVEL DVSYNGITVL PDSLGCLRRI QKLSVEGNPL ISPPFEVVEQ GLEALKQYMS
301: EKMTESYKKT PTKKKSWGIG KLVKYGLSSS PGRSTGREDG KEGFINVSDY RQIDGIASPR HVSLFNPRRL LSPLSAYFSP PRY
101: ARMLNLWALD LQSNQLKTLP NSIGCLSKLK FLNVSGNYLQ SLPKTIEDCR SLEELNANFN ELTRLPDAIG FELTNLTKLS VNSNKLVLLP NSVSYLTSLR
201: VLDARLNRLS SLPEDLENLV NLQVLNVSQN FQHLTTLPYS VGLLISLVEL DVSYNGITVL PDSLGCLRRI QKLSVEGNPL ISPPFEVVEQ GLEALKQYMS
301: EKMTESYKKT PTKKKSWGIG KLVKYGLSSS PGRSTGREDG KEGFINVSDY RQIDGIASPR HVSLFNPRRL LSPLSAYFSP PRY
Arabidopsis Description
PIRL8Plant intracellular Ras-group-related LRR protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWE5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.