CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73881	Canola	cytosol	97.91	97.91
Bra001399.1-P	Field mustard	plastid	97.67	84.34
CDY01012	Canola	plastid	80.93	72.8
AT3G11330.1	Thale cress	plastid	83.95	72.34
CDY08535	Canola	plastid	82.09	71.03
CDX70122	Canola	cytosol	75.81	67.49
CDX98871	Canola	cytosol	75.81	67.49
VIT_17s0000g09230.t01	Wine grape	cytosol	61.4	58.8
GSMUA_Achr1P13500_001	Banana	plastid	60.7	53.37
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	60.23	51.7
KRH63625	Soybean	nucleus	61.4	51.46
KRH57134	Soybean	plastid	58.37	49.12
PGSC0003DMT400046655	Potato	cytosol	58.84	48.1
HORVU7Hr1G066320.3	Barley	cytosol	31.16	47.86
Zm00001d025681_P001	Maize	plasma membrane	55.81	47.81
Solyc03g112270.2.1	Tomato	cytosol, nucleus, plastid	57.21	46.77
TraesCS6D01G191800.1	Wheat	plastid	53.49	46.65
Os02t0593600-01	Rice	plasma membrane	54.19	46.51
TraesCS2D01G335800.1	Wheat	cytosol, plastid	53.72	46.02
TraesCS2B01G354900.1	Wheat	plastid	53.26	45.62
EES10994	Sorghum	plastid	54.19	45.6
TraesCS2A01G327100.1	Wheat	cytosol, plastid	53.26	45.53
CDY16042	Canola	cytosol	48.6	45.14
CDY26604	Canola	cytosol	48.6	45.14
CDY69629	Canola	cytosol	35.58	45.0
HORVU6Hr1G053210.1	Barley	cytosol, plastid	53.72	44.77
HORVU2Hr1G082540.6	Barley	cytosol, mitochondrion	42.09	44.15
EES05350	Sorghum	plastid	49.77	42.54
CDY48988	Canola	cytosol	46.74	42.49
Zm00001d017071_P002	Maize	plastid	51.16	41.59
CDY30187	Canola	nucleus	24.65	37.99
CDX82667	Canola	nucleus, plastid	29.07	32.55
CDY39144	Canola	nucleus, plastid	29.07	32.55
CDY42760	Canola	cytosol, plastid	29.77	32.41
CDX89369	Canola	cytosol, plastid	29.77	32.16
CDY46713	Canola	nucleus	27.21	31.97
CDX94383	Canola	cytosol	29.3	31.66
CDX92748	Canola	cytosol, plasma membrane, plastid	26.98	31.02
CDX72539	Canola	nucleus	25.58	27.99
CDY14024	Canola	mitochondrion	16.51	27.0
CDY40770	Canola	cytosol	16.28	26.52
CDX81078	Canola	mitochondrion	16.05	26.34
CDX78316	Canola	cytosol, mitochondrion, nucleus	16.05	26.34
CDY07843	Canola	nucleus	29.3	25.2
CDY66405	Canola	cytosol	28.84	24.8
CDY30364	Canola	cytosol	29.3	24.66
CDX69142	Canola	cytosol	30.0	23.71
CDX75505	Canola	cytosol	29.53	23.52
CDY26809	Canola	nucleus	29.07	23.41
CDY40632	Canola	nucleus	29.53	23.3
CDY29703	Canola	cytosol	17.91	21.21
CDX97851	Canola	cytosol	17.91	21.21
CDX97667	Canola	nucleus	22.79	16.75
CDY56828	Canola	nucleus	22.09	16.24

Protein Annotations

EnsemblPlants:CDY00732	EnsemblPlantsGene:GSBRNA2T00110588001	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PANTHER:PTHR44373
PFAM:PF13855	PFscan:PS51450	PRINTS:PR00019	ProteinID:CDY00732	ProteinID:CDY00732.1	SEG:seg
SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0004EE5DAC	MapMan:35.1	:

Description

BnaC03g37160D

Coordinates

chrLK031921:-:539290..541781

Molecular Weight (calculated)

48054.5 Da

IEP (calculated)

4.475

GRAVY (calculated)

-0.235

Length

430 amino acids

Sequence
(BLAST)

001: MPHLAEPGVL ASMTKAITDV AETRSVLRTL GPRPDHEAVD RARAKLNEIE GMLSERREMD QEKAWCESIL KLDEVHGSYE KLLSEAEERL VRIYEFAEKK
101: AKVEEGEGSV EEVEVNEEVV GILQEALANP VERVDLSGRK LSLLPEAFGR IQGLLVLNLS NNQLQAIPDS IAGLHGLAEL DVSGNLLETL PDSVGLLSNL
201: KILNVSTNKL TSLPDSICRC GSLVVLDVSF NRLTYLPTNI GFELVNLEKL MIQYNKIRSL PSSIGEMRSL TYLDAHFNEL HGLPDSFVLL TNLEYLNLSS
301: NFSDLKDLPS SFGDLISLQK LDLSNNQIHA LPDTFGTLES LVELNVDQNP LVVPPKEVVN EGVVAVKMYM GKRRITMLEE EERRRVEEEM EQANAGWLTR
401: TTSKLKSYVS DVSEYLNPSS PRDPYLEREL

Best Arabidopsis Sequence Match ( AT3G11330.1 )
(BLAST)

001: MAAEPNPKNF PVLSYVLARL PSFTAKSPSS SVPPFDIEQP PPSSSSSSIE IVTQMPHLTQ PDVLASMTSA ISDVAETRSI LRTLGPRPDH ESVDKARAKL
101: SEIESFLSES FEDIALTDAA AKDEKRRQEM DQEKTWCESI LKLDEVHASY EKLLKEAEER LVRIYESAEK NAAEDEENVA AVEVNEEVVG ILQHASANPV
201: DRVDLSGRKL RLLPEAFGRI QGLLVLNLSN NKLESIPDSI AGLHSLVELD VSTNSLETLP DSIGLLSKLK ILNVSTNKLT SLPDSICRCG SLVILDVSFN
301: RLTYLPTNIG PELVNLEKLL VQYNKIRSFP TSIGEMRSLK HLDAHFNELN GLPDSFVLLT NLEYLNLSSN FSDLKDLPFS FGELISLQEL DLSNNQIHAL
401: PDTFGTLDSL TKLNVDQNPL VVPPEEVVKE GVEAVKTYMG QRRISMLEEE EKKKMEEEME QANAGWLTRT TSKLKTYVAD VSEYLGSNSP RDPYLERQL

Arabidopsis Description

PIRL9Plant intracellular Ras-group-related LRR protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.