Factsheet for Bra001399.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73881	Canola	cytosol	85.74	99.3
CDY00732	Canola	cytosol	84.34	97.67
AT3G11330.1	Thale cress	plastid	83.73	83.57
Bra034849.1-P	Field mustard	plastid	81.53	81.69
Bra034850.1-P	Field mustard	nucleus	10.04	79.37
Bra009140.1-P	Field mustard	cytosol	73.29	72.42
VIT_17s0000g09230.t01	Wine grape	cytosol	53.61	59.47
KRH63625	Soybean	nucleus	58.63	56.92
GSMUA_Achr1P13500_001	Banana	plastid	55.82	56.85
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	55.42	55.09
KRH57134	Soybean	plastid	55.42	54.01
PGSC0003DMT400046655	Potato	cytosol	54.82	51.9
Zm00001d025681_P001	Maize	plasma membrane	52.01	51.59
Solyc03g112270.2.1	Tomato	cytosol, nucleus, plastid	54.02	51.14
TraesCS6D01G191800.1	Wheat	plastid	50.0	50.51
EES10994	Sorghum	plastid	51.2	49.9
TraesCS2D01G335800.1	Wheat	cytosol, plastid	50.0	49.6
Os02t0593600-01	Rice	plasma membrane	49.8	49.5
TraesCS2B01G354900.1	Wheat	plastid	49.6	49.2
TraesCS2A01G327100.1	Wheat	cytosol, plastid	49.6	49.11
HORVU6Hr1G053210.1	Barley	cytosol, plastid	50.2	48.45
Bra026944.1-P	Field mustard	cytosol	43.57	46.87
HORVU7Hr1G066320.3	Barley	cytosol	26.1	46.43
EES05350	Sorghum	plastid	46.79	46.32
Zm00001d017071_P002	Maize	plastid	48.19	45.37
Bra032935.1-P	Field mustard	plastid	40.36	45.07
HORVU2Hr1G082540.6	Barley	cytosol, mitochondrion	35.94	43.66
Bra038857.1-P	Field mustard	nucleus, plastid	25.3	32.81
Bra024119.1-P	Field mustard	cytosol	24.1	32.79
Bra019126.1-P	Field mustard	cytosol, plastid	25.9	32.66
Bra013944.1-P	Field mustard	cytosol, plastid	25.9	32.41
Bra028680.1-P	Field mustard	cytosol	14.06	26.52
Bra005960.1-P	Field mustard	cytosol, mitochondrion, nucleus	13.86	26.34
Bra024514.1-P	Field mustard	cytosol	25.5	25.4
Bra011617.1-P	Field mustard	cytosol	23.29	25.38
Bra037271.1-P	Field mustard	cytosol	25.5	24.66
Bra017712.1-P	Field mustard	nucleus	26.31	24.04
Bra021606.1-P	Field mustard	cytosol	15.66	21.49
Bra027245.1-P	Field mustard	nucleus	19.08	16.24

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EnsemblPlantsGene:Bra001399	EnsemblPlants:Bra001399.1	EnsemblPlants:Bra001399.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M4CB20	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR44373
PANTHER:PTHR44373:SF3	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0002540714	SEG:seg

Description

AT3G11330 (E=5e-199) | leucine-rich repeat family protein

Coordinates

chrA03:-:16183476..16186115

Molecular Weight (calculated)

55397.2 Da

IEP (calculated)

4.403

GRAVY (calculated)

-0.233

Length

498 amino acids

Sequence
(BLAST)

001: MAADPNPKKF PVLSYVLARL PSFTPAKSSS SAPAFDVEQP PPQSSIEIEM PHLAEPGVLA SMTKAITDVA ETRSVLRTLG PRPDHEAVDR ARAKLNEIEG
101: MLSESFEDIA LTEAAGEDEI EKRRREMDQE KTWCESILKL DEVHGSYEKL LSEAEERLVR IYEFAEKKAK VEEGEGGVEE VEVNEEVVGI LQEALANPVE
201: RVDLSGRKLS LLPEAFGRIQ GLLVLNLSNN QLQAIPDSIA GLHGLVELDV SGNLLETLPD SIGLLSKLKI LNVSTNKLTA LPDSICRCGS FVVLDVIFNR
301: LTYLPTNIGS ELVNLEKLMI QYNKIRSLPS SIGEMRSLTY LDAHFNELHG LPDSFVLLTN LEYLNLSSNF SDLKDLPSSF GDLISLQKLD LSNNQIHALP
401: DTFGTLESLV ELNVDQNPLV VPPVEVVNEG VVAVKMYMGK RRITMLEEEE RRRVEEEMEQ ANAGWLTRTT SKLKSYVSDV SEYLNPSSPR DPYLEREL

Best Arabidopsis Sequence Match ( AT3G11330.1 )
(BLAST)

001: MAAEPNPKNF PVLSYVLARL PSFTAKSPSS SVPPFDIEQP PPSSSSSSIE IVTQMPHLTQ PDVLASMTSA ISDVAETRSI LRTLGPRPDH ESVDKARAKL
101: SEIESFLSES FEDIALTDAA AKDEKRRQEM DQEKTWCESI LKLDEVHASY EKLLKEAEER LVRIYESAEK NAAEDEENVA AVEVNEEVVG ILQHASANPV
201: DRVDLSGRKL RLLPEAFGRI QGLLVLNLSN NKLESIPDSI AGLHSLVELD VSTNSLETLP DSIGLLSKLK ILNVSTNKLT SLPDSICRCG SLVILDVSFN
301: RLTYLPTNIG PELVNLEKLL VQYNKIRSFP TSIGEMRSLK HLDAHFNELN GLPDSFVLLT NLEYLNLSSN FSDLKDLPFS FGELISLQEL DLSNNQIHAL
401: PDTFGTLDSL TKLNVDQNPL VVPPEEVVKE GVEAVKTYMG QRRISMLEEE EKKKMEEEME QANAGWLTRT TSKLKTYVAD VSEYLGSNSP RDPYLERQL

Arabidopsis Description

PIRL9Plant intracellular Ras-group-related LRR protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.