Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
- extracellular 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400046655 | Potato | cytosol | 95.06 | 95.06 |
| VIT_17s0000g09230.t01 | Wine grape | cytosol | 57.41 | 67.26 |
| GSMUA_Achr1P13500_001 | Banana | plastid | 57.6 | 61.96 |
| GSMUA_Achr8P28520_001 | Banana | cytosol, nucleus, plastid | 57.79 | 60.68 |
| KRH63625 | Soybean | nucleus | 57.03 | 58.48 |
| CDY00732 | Canola | cytosol | 46.77 | 57.21 |
| CDX73881 | Canola | cytosol | 46.58 | 56.98 |
| KRH57134 | Soybean | plastid | 54.37 | 55.97 |
| AT5G05850.1 | Thale cress | plastid | 53.8 | 55.93 |
| CDX98871 | Canola | cytosol | 50.95 | 55.49 |
| CDX70122 | Canola | cytosol | 50.95 | 55.49 |
| CDY01012 | Canola | plastid | 50.19 | 55.23 |
| AT3G11330.1 | Thale cress | plastid | 52.28 | 55.11 |
| Bra009140.1-P | Field mustard | cytosol | 52.47 | 54.76 |
| Bra001399.1-P | Field mustard | plastid | 51.14 | 54.02 |
| CDY08535 | Canola | plastid | 50.95 | 53.92 |
| Bra034849.1-P | Field mustard | plastid | 50.95 | 53.92 |
| Zm00001d025681_P001 | Maize | plasma membrane | 50.57 | 52.99 |
| TraesCS2D01G335800.1 | Wheat | cytosol, plastid | 50.0 | 52.39 |
| EES10994 | Sorghum | plastid | 50.76 | 52.25 |
| TraesCS2A01G327100.1 | Wheat | cytosol, plastid | 49.62 | 51.89 |
| TraesCS2B01G354900.1 | Wheat | plastid | 49.43 | 51.79 |
| TraesCS6D01G191800.1 | Wheat | plastid | 48.1 | 51.32 |
| Os02t0593600-01 | Rice | plasma membrane | 48.48 | 50.9 |
| EES05350 | Sorghum | plastid | 47.34 | 49.5 |
| HORVU6Hr1G053210.1 | Barley | cytosol, plastid | 47.15 | 48.06 |
| Zm00001d017071_P002 | Maize | plastid | 47.91 | 47.64 |
| HORVU2Hr1G082540.6 | Barley | cytosol, mitochondrion | 36.31 | 46.59 |
| HORVU7Hr1G066320.3 | Barley | cytosol | 24.52 | 46.07 |
| Solyc12g017480.1.1 | Tomato | cytosol | 23.0 | 33.24 |
| Solyc12g040320.1.1 | Tomato | mitochondrion | 13.12 | 26.44 |
| Solyc03g115410.2.1 | Tomato | cytosol | 12.55 | 25.48 |
| Solyc08g006970.2.1 | Tomato | cytosol | 24.14 | 25.0 |
| Solyc02g082350.2.1 | Tomato | nucleus | 25.29 | 23.05 |
| Solyc06g007250.2.1 | Tomato | cytosol | 15.4 | 21.6 |
| Solyc10g006930.2.1 | Tomato | cytosol | 18.25 | 16.44 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | UniProt:K4BK81 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp |
| PFAM:PF00560 | PFAM:PF13855 | PFscan:PS51450 | PANTHER:PTHR44373 | PANTHER:PTHR44373:SF3 | SMART:SM00364 |
| SMART:SM00369 | SUPFAM:SSF52058 | EnsemblPlantsGene:Solyc03g112270.2 | EnsemblPlants:Solyc03g112270.2.1 | UniParc:UPI00027674B3 | SEG:seg |
Description
No Description!
Coordinates
chr3:-:62723608..62727779
Molecular Weight (calculated)
58790.5 Da
IEP (calculated)
4.635
GRAVY (calculated)
-0.310
Length
526 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNPTKFPI LSYVMSKLPS MGRRTTATAD EFDIEQPQNH PQPPPEPHFD ITERMPHLTD PKVVSAMRSA VADVSQTRSM LKTLGERPFH ELVDTARVKL
101: AEIDADMSKR LEEIVLSPRP PEMERQDWRL DMAIKEDECR KGVEKEREEY KALIALDELH EAYEKMLKDA EQRLEKIYET AVAGGDVESI GESSGEKSSE
201: LKEEVNEEVI RILQEASGKS VERVDLSGRQ LRMLPEAFGK IHSLIVLNLS NNQLKVVPDS IASLEHLEEL HLSSNILESL PDSIGLLCNL KILDVSGNKL
301: VALPDSICHC RSLVEFDAGF NKLSYLPTNI GYELVNLQRL SLSFNKLRSL PTSFGEMKSL RLLDVHFNEL HGLPLSFGNL TNLEIVNLSN NFSDLTKLPD
401: TIGDLINLKE LDLSNNQIHE LPDTISRLDN LTVLKLDENP LVIPPKEVVV EGVEAVKAYM IKRRLDILLA EDPEIMLEEV GQTPTGLLTR STSWLSGTVS
501: NVLGTVAGYL GGGGKSDPDH YLNQQL
101: AEIDADMSKR LEEIVLSPRP PEMERQDWRL DMAIKEDECR KGVEKEREEY KALIALDELH EAYEKMLKDA EQRLEKIYET AVAGGDVESI GESSGEKSSE
201: LKEEVNEEVI RILQEASGKS VERVDLSGRQ LRMLPEAFGK IHSLIVLNLS NNQLKVVPDS IASLEHLEEL HLSSNILESL PDSIGLLCNL KILDVSGNKL
301: VALPDSICHC RSLVEFDAGF NKLSYLPTNI GYELVNLQRL SLSFNKLRSL PTSFGEMKSL RLLDVHFNEL HGLPLSFGNL TNLEIVNLSN NFSDLTKLPD
401: TIGDLINLKE LDLSNNQIHE LPDTISRLDN LTVLKLDENP LVIPPKEVVV EGVEAVKAYM IKRRLDILLA EDPEIMLEEV GQTPTGLLTR STSWLSGTVS
501: NVLGTVAGYL GGGGKSDPDH YLNQQL
001: MATELNPKNF PVLSYVLDRL PSFTAKSSSS SDVEPPPSKS DPSSSSNHSI EIVTQMPHLA HPDVLASMTN ATADVSQTRS VLRTLGPRPD HETVDRARAR
101: LREIDASLSE SFEEIALSPN DIDVAEKEQK RREAVEQEKI WYKSILKLNE LHESYEKLLK EAEERLVRIY ESAEKNAAAV AEEEAAEVEV NEEVVSILQQ
201: AAENPLDRVD LSGRKLKLLP EAFGKIQGLL VLNLYNNQLQ AIPDSIAGLH NLLELDVSTN FLETLPDSIG LLSKLKILNV SCNKLTTLPD SICHCGSLVV
301: LDASYNNLTY LPTNIGFELV KLEKLLIHLN KIRSLPTSIG EMRSLRYLDA HFNELNGLPN SFGLLTNLEY LNLSSNFSDL QDLPASFGDL ISLQELDLSN
401: NQIHSLPDAF GTLVNLTKLN LDQNPLVVPP DEVVKQGVDA VKMYMGKRWV SMLEEEEKMA NMKDEMDQTN TDWLTRTTSK LKTYVTEVSE YLGSNPPRDP
501: YLDQQL
101: LREIDASLSE SFEEIALSPN DIDVAEKEQK RREAVEQEKI WYKSILKLNE LHESYEKLLK EAEERLVRIY ESAEKNAAAV AEEEAAEVEV NEEVVSILQQ
201: AAENPLDRVD LSGRKLKLLP EAFGKIQGLL VLNLYNNQLQ AIPDSIAGLH NLLELDVSTN FLETLPDSIG LLSKLKILNV SCNKLTTLPD SICHCGSLVV
301: LDASYNNLTY LPTNIGFELV KLEKLLIHLN KIRSLPTSIG EMRSLRYLDA HFNELNGLPN SFGLLTNLEY LNLSSNFSDL QDLPASFGDL ISLQELDLSN
401: NQIHSLPDAF GTLVNLTKLN LDQNPLVVPP DEVVKQGVDA VKMYMGKRWV SMLEEEEKMA NMKDEMDQTN TDWLTRTTSK LKTYVTEVSE YLGSNPPRDP
501: YLDQQL
Arabidopsis Description
PIRL1Plant intracellular Ras-group-related LRR protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFJ3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.