CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08535	Canola	plastid	98.12	94.37
CDX73881	Canola	cytosol	73.64	81.86
CDY00732	Canola	cytosol	72.8	80.93
AT3G11330.1	Thale cress	plastid	83.05	79.56
CDX70122	Canola	cytosol	72.59	71.84
CDX98871	Canola	cytosol	72.59	71.84
VIT_17s0000g09230.t01	Wine grape	cytosol	53.35	56.79
KRH63625	Soybean	nucleus	60.67	56.53
GSMUA_Achr1P13500_001	Banana	plastid	56.49	55.21
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	56.69	54.09
KRH57134	Soybean	plastid	57.53	53.82
Zm00001d025681_P001	Maize	plasma membrane	55.23	52.59
TraesCS2D01G335800.1	Wheat	cytosol, plastid	53.56	51.0
PGSC0003DMT400046655	Potato	cytosol	56.07	50.95
TraesCS2B01G354900.1	Wheat	plastid	53.35	50.8
TraesCS6D01G191800.1	Wheat	plastid	52.3	50.71
TraesCS2A01G327100.1	Wheat	cytosol, plastid	53.35	50.7
EES10994	Sorghum	plastid	53.97	50.49
Solyc03g112270.2.1	Tomato	cytosol, nucleus, plastid	55.23	50.19
Os02t0593600-01	Rice	plasma membrane	52.09	49.7
HORVU6Hr1G053210.1	Barley	cytosol, plastid	52.93	49.03
CDY69629	Canola	cytosol	34.73	48.82
HORVU7Hr1G066320.3	Barley	cytosol	28.45	48.57
CDY26604	Canola	cytosol	45.61	47.08
CDY16042	Canola	cytosol	45.4	46.87
EES05350	Sorghum	plastid	48.54	46.12
CDY48988	Canola	cytosol	45.19	45.67
HORVU2Hr1G082540.6	Barley	cytosol, mitochondrion	38.7	45.12
Zm00001d017071_P002	Maize	plastid	49.37	44.61
CDY30187	Canola	nucleus	23.01	39.43
CDX82667	Canola	nucleus, plastid	26.99	33.59
CDY39144	Canola	nucleus, plastid	26.99	33.59
CDY42760	Canola	cytosol, plastid	27.62	33.42
CDY46713	Canola	nucleus	25.1	32.79
CDX89369	Canola	cytosol, plastid	27.2	32.66
CDX94383	Canola	cytosol	26.99	32.41
CDX92748	Canola	cytosol, plasma membrane, plastid	24.69	31.55
CDX72539	Canola	nucleus	22.8	27.74
CDY14024	Canola	mitochondrion	14.23	25.86
CDY40770	Canola	cytosol	14.23	25.76
CDX81078	Canola	mitochondrion	13.6	24.81
CDX78316	Canola	cytosol, mitochondrion, nucleus	13.6	24.81
CDY07843	Canola	nucleus	25.94	24.8
CDY30364	Canola	cytosol	26.36	24.66
CDY66405	Canola	cytosol	25.73	24.6
CDX69142	Canola	cytosol	27.2	23.9
CDX75505	Canola	cytosol	26.78	23.7
CDY26809	Canola	nucleus	26.15	23.41
CDY40632	Canola	nucleus	26.36	23.12
CDY29703	Canola	cytosol	16.95	22.31
CDX97851	Canola	cytosol	16.74	22.04
CDX97667	Canola	nucleus	19.67	16.07
CDY56828	Canola	nucleus	19.04	15.56

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EnsemblPlants:CDY01012	ProteinID:CDY01012	ProteinID:CDY01012.1	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00111034001	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450
PANTHER:PTHR44373	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0004EE52B3	SEG:seg

Description

BnaC05g41880D

Coordinates

chrLK031923:-:630557..633040

Molecular Weight (calculated)

52896.4 Da

IEP (calculated)

4.580

GRAVY (calculated)

-0.185

Length

478 amino acids

Sequence
(BLAST)

001: MAADPNPNKF PVLSYVLSRL PSFTATKSSS PSSSSSAPAF DVEQPIEIVT QMPHLGHPSV LASMTKAISD VAQTRSILRT LGPRPDHESV DKARAKLTEI
101: EGDEEKKKEE MGKDKTVCES ILKLDEVHDS YEKLLKEAEE RLVRIYESEV VGGEEGVAAA VEVNEEVVGI LQHALDNPVE RVDLSGRKLR LLSEAFGRIQ
201: GLLVLDLSNN QLQAIPDSIA GLHDLVELNV SGNILETLPD SIGLLSKLKI LNVSTNKLTV LPDSICRCGS LVILDVSFNR LTYLPTNIGS ELVNLEKLMI
301: QYNKIRSFPS SIGEMISLTY LDAHFNELHG LPDSFCLLAN LEYLNLSSNF SDLIELPISF GDLINLQELD LSNNQIHALP DTFGSLESLT KLNVSQNPLV
401: VPPEEVVKEG AEVVKMYMGK RRISMFEVEE KRKMEEEMEQ ANAGWLTRTT SKLKTYVTDV SEYLGSGSPR DSYLEQKL

Best Arabidopsis Sequence Match ( AT3G11330.1 )
(BLAST)

001: MAAEPNPKNF PVLSYVLARL PSFTAKSPSS SVPPFDIEQP PPSSSSSSIE IVTQMPHLTQ PDVLASMTSA ISDVAETRSI LRTLGPRPDH ESVDKARAKL
101: SEIESFLSES FEDIALTDAA AKDEKRRQEM DQEKTWCESI LKLDEVHASY EKLLKEAEER LVRIYESAEK NAAEDEENVA AVEVNEEVVG ILQHASANPV
201: DRVDLSGRKL RLLPEAFGRI QGLLVLNLSN NKLESIPDSI AGLHSLVELD VSTNSLETLP DSIGLLSKLK ILNVSTNKLT SLPDSICRCG SLVILDVSFN
301: RLTYLPTNIG PELVNLEKLL VQYNKIRSFP TSIGEMRSLK HLDAHFNELN GLPDSFVLLT NLEYLNLSSN FSDLKDLPFS FGELISLQEL DLSNNQIHAL
401: PDTFGTLDSL TKLNVDQNPL VVPPEEVVKE GVEAVKTYMG QRRISMLEEE EKKKMEEEME QANAGWLTRT TSKLKTYVAD VSEYLGSNSP RDPYLERQL

Arabidopsis Description

PIRL9Plant intracellular Ras-group-related LRR protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.