Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42760 | Canola | cytosol, plastid | 91.71 | 86.84 |
| CDX89369 | Canola | cytosol, plastid | 85.83 | 80.65 |
| CDX94383 | Canola | cytosol | 85.56 | 80.4 |
| AT4G26050.1 | Thale cress | cytosol | 81.55 | 79.63 |
| VIT_11s0052g00390.t01 | Wine grape | cytosol | 54.55 | 66.23 |
| KRH02753 | Soybean | cytosol | 54.28 | 56.39 |
| KRH37361 | Soybean | cytosol | 52.94 | 55.77 |
| CDY30187 | Canola | nucleus | 41.18 | 55.2 |
| PGSC0003DMT400016538 | Potato | mitochondrion | 53.21 | 54.82 |
| Solyc12g017480.1.1 | Tomato | cytosol | 52.67 | 54.12 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.93 | 53.82 |
| GSMUA_Achr1P23570_001 | Banana | nucleus | 49.2 | 53.64 |
| CDY46713 | Canola | nucleus | 52.41 | 53.55 |
| KRH12356 | Soybean | cytosol | 51.6 | 53.17 |
| CDX82667 | Canola | nucleus, plastid | 54.01 | 52.6 |
| CDY39144 | Canola | nucleus, plastid | 54.01 | 52.6 |
| Os04t0605300-01 | Rice | nucleus | 48.66 | 51.7 |
| KXG27059 | Sorghum | cytosol, nucleus, plastid | 48.66 | 50.14 |
| Zm00001d002402_P001 | Maize | cytosol, nucleus, plastid | 48.4 | 49.86 |
| TraesCS2D01G430800.1 | Wheat | cytosol, nucleus, plastid | 47.86 | 49.45 |
| Zm00001d002399_P001 | Maize | nucleus | 33.16 | 49.4 |
| TraesCS2A01G432800.1 | Wheat | cytosol, nucleus, plastid | 48.13 | 49.32 |
| TraesCS2B01G454100.1 | Wheat | cytosol, nucleus, plastid | 47.59 | 49.17 |
| HORVU2Hr1G101090.6 | Barley | plastid | 48.66 | 43.13 |
| CDX73881 | Canola | cytosol | 31.28 | 27.21 |
| CDY00732 | Canola | cytosol | 31.02 | 26.98 |
| CDX70122 | Canola | cytosol | 32.62 | 25.26 |
| CDX98871 | Canola | cytosol | 32.62 | 25.26 |
| CDY01012 | Canola | plastid | 31.55 | 24.69 |
| CDX72539 | Canola | nucleus | 25.94 | 24.68 |
| CDY26604 | Canola | cytosol | 29.41 | 23.76 |
| CDY08535 | Canola | plastid | 31.55 | 23.74 |
| CDY16042 | Canola | cytosol | 29.14 | 23.54 |
| CDY48988 | Canola | cytosol | 27.81 | 21.99 |
| CDX81078 | Canola | mitochondrion | 14.44 | 20.61 |
| CDY69629 | Canola | cytosol | 18.72 | 20.59 |
| CDY14024 | Canola | mitochondrion | 14.44 | 20.53 |
| CDY40770 | Canola | cytosol | 14.44 | 20.45 |
| CDX78316 | Canola | cytosol, mitochondrion, nucleus | 14.17 | 20.23 |
| CDY66405 | Canola | cytosol | 25.13 | 18.8 |
| CDY07843 | Canola | nucleus | 24.87 | 18.6 |
| CDX69142 | Canola | cytosol | 27.01 | 18.57 |
| CDX75505 | Canola | cytosol | 26.74 | 18.52 |
| CDY40632 | Canola | nucleus | 25.94 | 17.8 |
| CDY30364 | Canola | cytosol | 23.53 | 17.22 |
| CDY26809 | Canola | nucleus | 23.8 | 16.67 |
| CDY29703 | Canola | cytosol | 14.71 | 15.15 |
| CDX97851 | Canola | cytosol | 14.44 | 14.88 |
| CDX97667 | Canola | nucleus | 21.39 | 13.68 |
| CDY56828 | Canola | nucleus | 20.86 | 13.33 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | GO:A0A078DZL8 | EnsemblPlants:CDX92748 | ProteinID:CDX92748 | ProteinID:CDX92748.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00154570001 | InterPro:IPR001611 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF13855 | PFscan:PS51450 | PANTHER:PTHR44997 |
| SMART:SM00364 | SMART:SM00369 | SUPFAM:SSF52058 | TMHMM:TMhelix | UniParc:UPI0004EF1D0D | SEG:seg |
Description
BnaC07g40060D
Coordinates
chrLK031873:+:645575..648330
Molecular Weight (calculated)
42491.9 Da
IEP (calculated)
9.603
GRAVY (calculated)
-0.179
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGYEQMNQM TMTTTAMMKN FNKMGPINTP HKKTTRRSVS AIDGAACYIY IYIYIYIYIR WIIYLIFINL SMQQIPESLV ARMLNLWALD LHSNQLKTLP
101: NSIGCLSKLK VLNVSGNNLQ YLPKTIEDCR WLEELNANFN ELTMLPDTIG FELTNLTKLS VNSNKLVVLP SSLSHLTSLR VLDARLNRLG SLPDDLENLV
201: NLQVLNVSQN FQHLKELPYS VGLLISLVEL DVSYNGITVL PNSIGCLRRI QKLSLEGNPL ISPPFEVVEQ GLEAVKQYMS EKMTESYKET PMKKKLWGIG
301: KMVKYKTFNG LSSSPGRSPG RRTGGDHHGN EREGFINVSD YRQIDGIASP RHVSLFNPRR LLSPFSAYFS PPRY
101: NSIGCLSKLK VLNVSGNNLQ YLPKTIEDCR WLEELNANFN ELTMLPDTIG FELTNLTKLS VNSNKLVVLP SSLSHLTSLR VLDARLNRLG SLPDDLENLV
201: NLQVLNVSQN FQHLKELPYS VGLLISLVEL DVSYNGITVL PNSIGCLRRI QKLSLEGNPL ISPPFEVVEQ GLEAVKQYMS EKMTESYKET PMKKKLWGIG
301: KMVKYKTFNG LSSSPGRSPG RRTGGDHHGN EREGFINVSD YRQIDGIASP RHVSLFNPRR LLSPFSAYFS PPRY
001: MMGYEQMNQM TMTTTAMMKN YNKKGLINTP QKKMTRRSVS AIDGGAAATA KEGDRRQNIK TLDLSGMSLA SLSASSINLA SISKLDLSNN NIQKIPESLV
101: ARMLNLWALD LQSNQLKTLP NSIGCLSKLK FLNVSGNYLQ SLPKTIEDCR SLEELNANFN ELTRLPDAIG FELTNLTKLS VNSNKLVLLP NSVSYLTSLR
201: VLDARLNRLS SLPEDLENLV NLQVLNVSQN FQHLTTLPYS VGLLISLVEL DVSYNGITVL PDSLGCLRRI QKLSVEGNPL ISPPFEVVEQ GLEALKQYMS
301: EKMTESYKKT PTKKKSWGIG KLVKYGLSSS PGRSTGREDG KEGFINVSDY RQIDGIASPR HVSLFNPRRL LSPLSAYFSP PRY
101: ARMLNLWALD LQSNQLKTLP NSIGCLSKLK FLNVSGNYLQ SLPKTIEDCR SLEELNANFN ELTRLPDAIG FELTNLTKLS VNSNKLVLLP NSVSYLTSLR
201: VLDARLNRLS SLPEDLENLV NLQVLNVSQN FQHLTTLPYS VGLLISLVEL DVSYNGITVL PDSLGCLRRI QKLSVEGNPL ISPPFEVVEQ GLEALKQYMS
301: EKMTESYKKT PTKKKSWGIG KLVKYGLSSS PGRSTGREDG KEGFINVSDY RQIDGIASPR HVSLFNPRRL LSPLSAYFSP PRY
Arabidopsis Description
PIRL8Plant intracellular Ras-group-related LRR protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWE5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.