CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01012	Canola	plastid	94.37	98.12
Bra034849.1-P	Field mustard	plastid	97.99	97.99
CDX73881	Canola	cytosol	71.83	83.02
CDY00732	Canola	cytosol	71.03	82.09
AT3G11330.1	Thale cress	plastid	81.49	81.16
CDX70122	Canola	cytosol	71.03	73.08
CDX98871	Canola	cytosol	71.03	73.08
VIT_17s0000g09230.t01	Wine grape	cytosol	52.52	58.13
KRH63625	Soybean	nucleus	59.56	57.7
GSMUA_Achr1P13500_001	Banana	plastid	55.33	56.24
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	55.53	55.09
KRH57134	Soybean	plastid	56.54	54.99
Zm00001d025681_P001	Maize	plasma membrane	53.32	52.79
PGSC0003DMT400046655	Potato	cytosol	54.73	51.71
TraesCS6D01G191800.1	Wheat	plastid	51.11	51.52
TraesCS2D01G335800.1	Wheat	cytosol, plastid	51.71	51.2
TraesCS2B01G354900.1	Wheat	plastid	51.51	51.0
Solyc03g112270.2.1	Tomato	cytosol, nucleus, plastid	53.92	50.95
TraesCS2A01G327100.1	Wheat	cytosol, plastid	51.51	50.89
EES10994	Sorghum	plastid	52.11	50.68
Os02t0593600-01	Rice	plasma membrane	50.5	50.1
HORVU6Hr1G053210.1	Barley	cytosol, plastid	51.91	50.0
CDY69629	Canola	cytosol	33.4	48.82
HORVU7Hr1G066320.3	Barley	cytosol	27.36	48.57
CDY26604	Canola	cytosol	43.86	47.08
CDY16042	Canola	cytosol	43.66	46.87
EES05350	Sorghum	plastid	46.68	46.12
CDY48988	Canola	cytosol	43.66	45.88
HORVU2Hr1G082540.6	Barley	cytosol, mitochondrion	37.63	45.61
Zm00001d017071_P002	Maize	plastid	47.69	44.8
CDY30187	Canola	nucleus	22.33	39.78
CDY39144	Canola	nucleus, plastid	26.16	33.85
CDX82667	Canola	nucleus, plastid	26.16	33.85
CDY42760	Canola	cytosol, plastid	26.36	33.16
CDY46713	Canola	nucleus	24.35	33.06
CDX89369	Canola	cytosol, plastid	26.16	32.66
CDX94383	Canola	cytosol	25.96	32.41
CDX92748	Canola	cytosol, plasma membrane, plastid	23.74	31.55
CDX72539	Canola	nucleus	22.13	27.99
CDY14024	Canola	mitochondrion	14.29	27.0
CDY40770	Canola	cytosol	14.08	26.52
CDY07843	Canola	nucleus	25.75	25.6
CDX81078	Canola	mitochondrion	13.48	25.57
CDX78316	Canola	cytosol, mitochondrion, nucleus	13.48	25.57
CDY66405	Canola	cytosol	25.55	25.4
CDY30364	Canola	cytosol	25.96	25.24
CDX69142	Canola	cytosol	27.16	24.82
CDX75505	Canola	cytosol	26.36	24.26
CDY26809	Canola	nucleus	25.75	23.97
CDY40632	Canola	nucleus	26.16	23.85
CDY29703	Canola	cytosol	16.5	22.59
CDX97851	Canola	cytosol	16.3	22.31
CDX97667	Canola	nucleus	19.11	16.24
CDY56828	Canola	nucleus	18.51	15.73

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A078F278	EnsemblPlants:CDY08535	ProteinID:CDY08535	ProteinID:CDY08535.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00000315001	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF13855	PRINTS:PR00019
PFscan:PS51450	PANTHER:PTHR44373	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0004EE1F13
SEG:seg	:	:	:	:	:

Description

BnaA05g27710DBnaA05g27710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F278]

Coordinates

chrLK031986:+:609466..612609

Molecular Weight (calculated)

55033.7 Da

IEP (calculated)

4.422

GRAVY (calculated)

-0.218

Length

497 amino acids

Sequence
(BLAST)

001: MAADPNPNKF PVLSYVLSRL PSFTATKSSS PSSSSSSAPA FDVEQPIEIV TQMPHLAHPS VLASMTKAIS DVAQTRSILR TLGPRPDHES VDKARAKLSE
101: IEGILSESLN DIAINEGKDE DEDEKKREEM GKDKTVCESI LKLDEVHDSY EKLLKEAEER LVRIYEAEVV GGEEGVAAAV EVNEEVVGIL QQALDNRVER
201: VDLSGRKLRL LPEAFGRIQG LLVLDLSNNQ LQAIPDSIAG LHDLVELNVS GNILETLPDS IGLLSKLKIL NVSTNKLTVL PDSICRCGSL VILDVSFNRL
301: TYLPTNIGSE LVNLEKLMIQ YNKIRSFPSS IGEMISLTYL DAHFNELQGL PDSFCLLANL EYLNLSSNFS DLIELPISFG DLINLQELDL SNNQIHALPD
401: TFGSLESLTK LNVSQNPLVV PPEEVVKEGA EVVKMYMGKR RISMFEEEEK RKMEEEMEQA NAGWLTRTTS KLKTYVTDVS EYLGSGSPRD SYLEQKL

Best Arabidopsis Sequence Match ( AT3G11330.1 )
(BLAST)

001: MAAEPNPKNF PVLSYVLARL PSFTAKSPSS SVPPFDIEQP PPSSSSSSIE IVTQMPHLTQ PDVLASMTSA ISDVAETRSI LRTLGPRPDH ESVDKARAKL
101: SEIESFLSES FEDIALTDAA AKDEKRRQEM DQEKTWCESI LKLDEVHASY EKLLKEAEER LVRIYESAEK NAAEDEENVA AVEVNEEVVG ILQHASANPV
201: DRVDLSGRKL RLLPEAFGRI QGLLVLNLSN NKLESIPDSI AGLHSLVELD VSTNSLETLP DSIGLLSKLK ILNVSTNKLT SLPDSICRCG SLVILDVSFN
301: RLTYLPTNIG PELVNLEKLL VQYNKIRSFP TSIGEMRSLK HLDAHFNELN GLPDSFVLLT NLEYLNLSSN FSDLKDLPFS FGELISLQEL DLSNNQIHAL
401: PDTFGTLDSL TKLNVDQNPL VVPPEEVVKE GVEAVKTYMG QRRISMLEEE EKKKMEEEME QANAGWLTRT TSKLKTYVAD VSEYLGSNSP RDPYLERQL

Arabidopsis Description

PIRL9Plant intracellular Ras-group-related LRR protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.