CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024514.1-P	Field mustard	cytosol	99.2	99.2
CDY07843	Canola	nucleus	96.6	96.6
CDY30364	Canola	cytosol	85.6	83.76
CDY26809	Canola	nucleus	88.4	82.77
AT2G17440.1	Thale cress	cytosol	83.2	79.09
CDX72539	Canola	nucleus	54.4	69.21
CDX69142	Canola	cytosol	69.8	64.15
CDX75505	Canola	cytosol	69.0	63.89
CDY40632	Canola	nucleus	68.6	62.94
KRH28950	Soybean	cytosol	67.0	59.08
KRH76512	Soybean	nucleus	67.8	59.06
VIT_07s0031g02310.t01	Wine grape	cytosol	65.4	58.71
KRH39397	Soybean	nucleus	64.2	58.26
KRH07815	Soybean	cytosol	62.8	57.3
GSMUA_Achr5P23850_001	Banana	cytosol	62.2	56.44
GSMUA_Achr8P25490_001	Banana	nucleus	61.8	55.88
PGSC0003DMT400059678	Potato	nucleus	63.2	55.54
PGSC0003DMT400035497	Potato	cytosol	62.8	54.9
Solyc02g082350.2.1	Tomato	nucleus	62.6	54.25
Os08t0511700-00	Rice	plasma membrane	56.2	48.95
TraesCS7B01G143600.3	Wheat	nucleus	54.4	47.97
EES14257	Sorghum	nucleus	55.4	47.92
Zm00001d031470_P001	Maize	plasma membrane	54.6	47.31
TraesCS7A01G247900.2	Wheat	cytosol	53.8	47.19
TraesCS7D01G246700.1	Wheat	nucleus	53.6	47.02
CDY30187	Canola	nucleus	18.0	32.26
CDX73881	Canola	cytosol	25.0	29.07
CDY00732	Canola	cytosol	24.8	28.84
CDY69629	Canola	cytosol	18.8	27.65
CDX89369	Canola	cytosol, plastid	21.6	27.14
CDY46713	Canola	nucleus	19.8	27.05
CDY16042	Canola	cytosol	25.0	27.0
CDY26604	Canola	cytosol	25.0	27.0
CDY14024	Canola	mitochondrion	14.2	27.0
CDY40770	Canola	cytosol	14.2	26.89
CDX94383	Canola	cytosol	21.4	26.88
CDX78316	Canola	cytosol, mitochondrion, nucleus	14.0	26.72
CDX81078	Canola	mitochondrion	14.0	26.72
CDY42760	Canola	cytosol, plastid	21.0	26.58
CDX82667	Canola	nucleus, plastid	20.4	26.56
CDY39144	Canola	nucleus, plastid	20.4	26.56
CDX70122	Canola	cytosol	25.4	26.29
CDX98871	Canola	cytosol	25.4	26.29
CDY48988	Canola	cytosol	24.8	26.22
CDY01012	Canola	plastid	24.6	25.73
CDY08535	Canola	plastid	25.4	25.55
CDX92748	Canola	cytosol, plasma membrane, plastid	18.8	25.13
GSMUA_Achr6P03430_001	Banana	nucleus	21.8	23.09
CDX97851	Canola	cytosol	13.6	18.73
CDY29703	Canola	cytosol	13.6	18.73
CDY56828	Canola	nucleus	19.0	16.24
CDX97667	Canola	nucleus	18.6	15.9

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A078JIX0	EnsemblPlants:CDY66405	ProteinID:CDY66405	ProteinID:CDY66405.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00053566001	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF13855	PRINTS:PR00019
PFscan:PS51450	PANTHER:PTHR44513	PANTHER:PTHR44513:SF1	SMART:SM00364	SMART:SM00365	SMART:SM00369
SUPFAM:SSF52058	UniParc:UPI0004EE632F	SEG:seg	:	:	:

Description

BnaA06g39250DBnaA06g39250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JIX0]

Coordinates

chrLK035250:+:11354..13450

Molecular Weight (calculated)

55672.1 Da

IEP (calculated)

5.592

GRAVY (calculated)

-0.272

Length

500 amino acids

Sequence
(BLAST)

001: MDKRMDSMNQ VAEEIMRIHR SLPSRPEIDD VEAATSLIQN VEKDDQNRLD AIDRQVKSSE VPRELFDVLR EMKRGLVRFQ SKEQKREAAK VLDLESAHVL
101: FDELIQRASN CIASSPPSSN VKEPAPAPVK SSLYSDGLLA PRKPQVLDST LEAKKLTGHD GEKMSLIKLA TLIEVSAKKG TQELNLQHKL MDNLEWLPDS
201: VGKLLSLVRL DLSENCIMAL PETIGGLLSL TTLDLHSNRI AQLPESIGDL LNLVNLNLSG NQLTSLPSSF SRLINLEELD LSSNSLSVLP ESISSLVSLK
301: KLDVETNNIE EIPHSISGCS SLKELRADYN RLKALPGAVG KIVTLEILSV RYNNIRQLPT TMSSMANLKE LDVSFNELES VPESLCYATT LVKLNVGNNF
401: ANLRSLPGLI GNLEKLEELD MSNNQIRFLP FSFKALSQLR VLHTQQNPLE ELPRDIIQKG AQAVVQYMNE LVEARNTKSQ STKQKKSWVD SICFLCKSTN

Best Arabidopsis Sequence Match ( AT2G17440.1 )
(BLAST)

001: MDSKEMVVEE IMRIHRSLPL RPEIDDVETA TSLIQNVEKE DRNRLEAIDK LVKTSSSEVP LELFNVFKEM KKSLVRFQST EQTREATKIL DLESVHVVFD
101: ELIQRASFCI ASPNSTTALP RSVPVPAPVV SSDEIPFKSK EIISRDDTFV KKAKSSFYSD GLLAPSKPQV LDSTLHQAKN VAGNDGEKLS LIKLASLIEV
201: SAKKATQELN LQHRLMDQLE WLPDSLGKLS SLVRLDLSEN CIMVLPATIG GLISLTRLDL HSNRIGQLPE SIGDLLNLVN LNLSGNQLSS LPSSFNRLIH
301: LEELDLSSNS LSILPESIGS LVSLKKLDVE TNNIEEIPHS ISGCSSMEEL RADYNRLKAL PEAVGKLSTL EILTVRYNNI RQLPTTMSSM ANLKELDVSF
401: NELESVPESL CYAKTLVKLN IGNNFANLRS LPGLIGNLEK LEELDMSNNQ IRFLPYSFKT LSNLRVLQTE QNPLEELPRD ITEKGAQAVV QYMNDLVEAR
501: NTKSQRTKPK KSWVNSICFF CKSSTN

Arabidopsis Description

PIRL5Plant intracellular Ras-group-related LRR protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5G5E0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.