CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88676
EER88742
EER93519
EES01714
KXG29624
KXG37641
OQU84313
OQU88215

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35470.1	EER88676	AT5G43400.1	21798944
AT4G35470.1	EER88742	AT5G43400.1	21798944
AT4G35470.1	EER93519	AT5G43400.1	21798944
AT4G35470.1	EES01714	AT5G43400.1	21798944
AT4G35470.1	KXG29624	AT5G43400.1	21798944
AT4G35470.1	KXG37641	AT5G43400.1	21798944
AT4G35470.1	OQU84313	AT5G43400.1	21798944
AT4G35470.1	OQU88215	AT5G43400.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031470_P001	Maize	plasma membrane	90.31	90.47
TraesCS7B01G143600.3	Wheat	nucleus	75.09	76.54
Os08t0511700-00	Rice	plasma membrane	75.61	76.13
TraesCS7A01G247900.2	Wheat	cytosol	74.74	75.79
TraesCS7D01G246700.1	Wheat	nucleus	74.05	75.09
CDX72539	Canola	nucleus	42.73	62.85
GSMUA_Achr8P25490_001	Banana	nucleus	58.3	60.94
GSMUA_Achr5P23850_001	Banana	cytosol	57.96	60.8
VIT_07s0031g02310.t01	Wine grape	cytosol	55.71	57.81
KRH39397	Soybean	nucleus	54.67	57.35
Bra011617.1-P	Field mustard	cytosol	45.16	57.11
KRH07815	Soybean	cytosol	53.98	56.93
KRH76512	Soybean	nucleus	56.06	56.45
CDX75505	Canola	cytosol	52.25	55.93
KRH28950	Soybean	cytosol	54.67	55.73
CDX69142	Canola	cytosol	52.42	55.7
Bra024514.1-P	Field mustard	cytosol	48.1	55.6
CDY40632	Canola	nucleus	52.42	55.6
Bra017712.1-P	Field mustard	nucleus	52.42	55.6
CDY66405	Canola	cytosol	47.92	55.4
CDY07843	Canola	nucleus	47.92	55.4
AT4G35470.1	Thale cress	nucleus	52.6	55.37
CDY30364	Canola	cytosol	47.4	53.62
AT2G17440.1	Thale cress	cytosol	48.79	53.61
PGSC0003DMT400059678	Potato	nucleus	52.77	53.6
Bra037271.1-P	Field mustard	cytosol	47.75	53.59
PGSC0003DMT400035497	Potato	cytosol	51.73	52.27
CDY26809	Canola	nucleus	48.27	52.25
Solyc02g082350.2.1	Tomato	nucleus	51.73	51.82
KXG38871	Sorghum	cytosol	44.81	48.14
KXG27059	Sorghum	cytosol, nucleus, plastid	19.9	31.68
EER95291	Sorghum	cytosol	13.15	29.01
EES05350	Sorghum	plastid	23.01	26.44
EES10994	Sorghum	plastid	23.18	26.22
GSMUA_Achr6P03430_001	Banana	nucleus	21.28	26.06
EER94139	Sorghum	cytosol	12.63	19.52
EES07794	Sorghum	cytosol	15.4	15.19

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:8064016	UniProt:C5YIQ2	EnsemblPlants:EES14257	ProteinID:EES14257
ProteinID:EES14257.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009416	GO:GO:0009628
GO:GO:0009987	GO:GO:0016020	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF13855	PFscan:PS51450	PANTHER:PTHR44513	PANTHER:PTHR44513:SF1	SMART:SM00364
SMART:SM00365	SMART:SM00369	EnsemblPlantsGene:SORBI_3007G208600	SUPFAM:SSF52058	UniParc:UPI0001A87EA3	RefSeq:XP_002444762.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:63754649..63757498

Molecular Weight (calculated)

62284.4 Da

IEP (calculated)

7.966

GRAVY (calculated)

-0.188

Length

578 amino acids

Sequence
(BLAST)

001: MGTALDAAAF GSVDGVVGEI MRLHRSLPAR PALEEVEAAE ALAHAADREE RARLDAVARL RRPPAVPDEL FGVALEMHRA LAAFHCREQK RDATRLLELD
101: ALHGLFDDLI QRASQCVPSS SSSSSTRAAP RVTASKAAVT TAAASSSSSA ASSSAVAADS STDRYSSMGA NGYSAQRMVT GVGRVSMDDS YVKKAKAAVW
201: DDGGAAGSSH MPRGAVAANS VATRADGYGD GNEKLTLIKL ASMIEVAAKK GARDLNLQGK LMNQIEWLPD SIGKLTGLVT LDISENRILT LPEAIGRLSS
301: LAKLDAHSNR ISHLPDSIGD LSNLIYLDLR GNQLASLPPS LGRLVKLEEL DVSANHLTSL PDAIGSLKHL KKLIVETNNL DELPYTIGNC VSLVELRAGY
401: NHLKALPEAV GKLESLEVLS VRYNSIRGLP TTMASLTKLK EVDASFNELE SIPENFCFVT SLVKLNVGNN FADLQSLPRS IGNLEMLEEL DISNNQIRVL
501: PDSFGNLQHL RVLRAEENPL QVPPRDVALK GAQAAVQYMS EYVTKKATRS QPTKTKKTWV QLCFFSRPNK RKHDRIAS

Best Arabidopsis Sequence Match ( AT4G35470.1 )
(BLAST)

001: MDLMQMDKRL DSTEQVVEEI MRIHRSLPAR PGIDEVEAAK GLIDNVEKED QACLEAIARQ RKSSEVPGEL FMVLQEMKKG YVQFRSKEQI REALKLLDLE
101: SVHSLFDDFI QRASNCIASP SSNGSVSSRP PLPPATTTAA RSDSQSSLNF SERAPVRPKD MVSRDDSFVT KSKPSSLYSD GFAAPPRRPQ ILDSTLTTGN
201: DGEKLSLIKL ASLIEVSAKK ATQEINLQNK LTEQLEWLPD SLGKLSSLTS LDLSENHIVV LPNTIGGLSS LTKLDLHSNR IGQLPESIGE LLNLVYLNLG
301: SNQLSSLPSA FSRLVRLEEL DLSCNNLPIL PESIGSLVSL KKLDVETNDI EEIPYSIGGC SSLIELRADY NKLKALPEAI GKITTLEILS VRYNNIRQLP
401: TTMSSLASLK ELDVSFNELE SVPESLCFAT TLVKLNIGNN FADMVSLPRS IGNLEMLEEL DISNNQIRVL PDSFKMLTKL RVFRAQENPL HIPPRDIAEK
501: GPQAVVQYMN DLVETRNAKS LMVKPKKSWV QMCFFSKSNK RKQSSMEIV

Arabidopsis Description

PIRL4Plant intracellular Ras-group-related LRR protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.