Factsheet for Bra024514.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66405	Canola	cytosol	99.2	99.2
Bra037271.1-P	Field mustard	cytosol	86.0	83.5
AT2G17440.1	Thale cress	cytosol	82.8	78.71
Bra017712.1-P	Field mustard	nucleus	68.8	63.12
Bra011617.1-P	Field mustard	cytosol	56.0	61.27
KRH28950	Soybean	cytosol	67.0	59.08
KRH76512	Soybean	nucleus	67.8	59.06
VIT_07s0031g02310.t01	Wine grape	cytosol	65.6	58.89
KRH39397	Soybean	nucleus	64.6	58.62
KRH07815	Soybean	cytosol	63.2	57.66
GSMUA_Achr5P23850_001	Banana	cytosol	62.0	56.26
GSMUA_Achr8P25490_001	Banana	nucleus	61.8	55.88
PGSC0003DMT400059678	Potato	nucleus	63.0	55.36
PGSC0003DMT400035497	Potato	cytosol	62.6	54.72
Solyc02g082350.2.1	Tomato	nucleus	62.8	54.42
Os08t0511700-00	Rice	plasma membrane	55.8	48.61
EES14257	Sorghum	nucleus	55.6	48.1
TraesCS7B01G143600.3	Wheat	nucleus	54.2	47.8
Zm00001d031470_P001	Maize	plasma membrane	54.8	47.49
TraesCS7A01G247900.2	Wheat	cytosol	53.4	46.84
TraesCS7D01G246700.1	Wheat	nucleus	53.2	46.67
Bra032935.1-P	Field mustard	plastid	24.6	27.58
Bra013944.1-P	Field mustard	cytosol, plastid	21.8	27.39
Bra024119.1-P	Field mustard	cytosol	19.8	27.05
Bra028680.1-P	Field mustard	cytosol	14.2	26.89
Bra019126.1-P	Field mustard	cytosol, plastid	21.2	26.84
Bra038857.1-P	Field mustard	nucleus, plastid	20.6	26.82
Bra026944.1-P	Field mustard	cytosol	24.8	26.78
Bra005960.1-P	Field mustard	cytosol, mitochondrion, nucleus	14.0	26.72
Bra009140.1-P	Field mustard	cytosol	26.2	25.99
Bra034849.1-P	Field mustard	plastid	25.4	25.55
Bra001399.1-P	Field mustard	plastid	25.4	25.5
GSMUA_Achr6P03430_001	Banana	nucleus	21.6	22.88
Bra021606.1-P	Field mustard	cytosol	13.6	18.73
Bra027245.1-P	Field mustard	nucleus	18.8	16.07
Bra034850.1-P	Field mustard	nucleus	1.2	9.52

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EnsemblPlantsGene:Bra024514	EnsemblPlants:Bra024514.1	EnsemblPlants:Bra024514.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M4E6V9	PFAM:PF00560	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450
PANTHER:PTHR44513	PANTHER:PTHR44513:SF1	SMART:SM00364	SMART:SM00365	SMART:SM00369	SUPFAM:SSF52058
UniParc:UPI000253F013	SEG:seg	:	:	:	:

Description

AT2G17440 (E=5e-157) | leucine-rich repeat family protein

Coordinates

chrA06:-:16348160..16349915

Molecular Weight (calculated)

55625.0 Da

IEP (calculated)

5.786

GRAVY (calculated)

-0.290

Length

500 amino acids

Sequence
(BLAST)

001: MDKRMDSRNQ VAEEIMRIHR SLPSRPEIDD VEAATSLIQN VEKDDQNRLD AIDRQVKGSE VPRELFDVLR EMKRGLVRFQ SKEQKREAAK VLDLESAHVL
101: FDELIQRASN CIASSPPSSN VKEPAPAPVK SSLYSDGLLA PRKPQVLDST LEAKKLTGHD GEKMSLIKLA TLIEVSAKKG TQELNLQHKL MDNLEWLPDS
201: VGKLLSLVRL DLSENCIMAL PETIGGLLSL TTLDLHSNRI AQLPESIGDL LNLVNLNLSG NQLTSLPSSF SRLINLEELD LSSNSLSVLP ESISSLVSLK
301: KLDVETNNIE EIPHSISGCS SLKELRADYN RLKALPGAVG KIATLEILSV RYNNIRQLPT TMSSMANLKE LDVSFNELES VPESLCYATT LVKLNVGNNF
401: ANLRSLPGLI GNLEKLEELD MSNNQIRFLP FSFKALSQLR VLHTQQNPLE ELPRDVIQKG AQAVVQYMNE LVEARNTKSQ STKQKKSWVD SICFLCKSTN

Best Arabidopsis Sequence Match ( AT2G17440.1 )
(BLAST)

001: MDSKEMVVEE IMRIHRSLPL RPEIDDVETA TSLIQNVEKE DRNRLEAIDK LVKTSSSEVP LELFNVFKEM KKSLVRFQST EQTREATKIL DLESVHVVFD
101: ELIQRASFCI ASPNSTTALP RSVPVPAPVV SSDEIPFKSK EIISRDDTFV KKAKSSFYSD GLLAPSKPQV LDSTLHQAKN VAGNDGEKLS LIKLASLIEV
201: SAKKATQELN LQHRLMDQLE WLPDSLGKLS SLVRLDLSEN CIMVLPATIG GLISLTRLDL HSNRIGQLPE SIGDLLNLVN LNLSGNQLSS LPSSFNRLIH
301: LEELDLSSNS LSILPESIGS LVSLKKLDVE TNNIEEIPHS ISGCSSMEEL RADYNRLKAL PEAVGKLSTL EILTVRYNNI RQLPTTMSSM ANLKELDVSF
401: NELESVPESL CYAKTLVKLN IGNNFANLRS LPGLIGNLEK LEELDMSNNQ IRFLPYSFKT LSNLRVLQTE QNPLEELPRD ITEKGAQAVV QYMNDLVEAR
501: NTKSQRTKPK KSWVNSICFF CKSSTN

Arabidopsis Description

PIRL5Plant intracellular Ras-group-related LRR protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5G5E0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.