Factsheet for Bra013944.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
cytosol 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89369	Canola	cytosol, plastid	99.25	99.25
CDX94383	Canola	cytosol	98.24	98.24
Bra019126.1-P	Field mustard	cytosol, plastid	90.45	91.14
AT4G26050.1	Thale cress	cytosol	84.92	88.25
VIT_11s0052g00390.t01	Wine grape	cytosol	55.03	71.1
KRH02753	Soybean	cytosol	56.03	61.94
KRH37361	Soybean	cytosol	54.02	60.56
PGSC0003DMT400016538	Potato	mitochondrion	55.03	60.33
GSMUA_Achr1P23570_001	Banana	nucleus	51.26	59.48
GSMUA_AchrUn_...	Banana	nucleus	50.75	59.41
Solyc12g017480.1.1	Tomato	cytosol	53.77	58.79
KRH12356	Soybean	cytosol	52.76	57.85
Bra024119.1-P	Field mustard	cytosol	53.02	57.65
Bra038857.1-P	Field mustard	nucleus, plastid	54.27	56.25
Os04t0605300-01	Rice	nucleus	48.99	55.4
TraesCS2D01G430800.1	Wheat	cytosol, nucleus, plastid	50.0	54.97
TraesCS2B01G454100.1	Wheat	cytosol, nucleus, plastid	49.75	54.7
TraesCS2A01G432800.1	Wheat	cytosol, nucleus, plastid	50.0	54.52
Zm00001d002399_P001	Maize	nucleus	33.92	53.78
Zm00001d002402_P001	Maize	cytosol, nucleus, plastid	48.49	53.17
KXG27059	Sorghum	cytosol, nucleus, plastid	48.49	53.17
HORVU2Hr1G101090.6	Barley	plastid	51.01	48.1
Bra034849.1-P	Field mustard	plastid	32.91	26.36
Bra009140.1-P	Field mustard	cytosol	32.91	25.99
Bra001399.1-P	Field mustard	plastid	32.41	25.9
Bra026944.1-P	Field mustard	cytosol	29.65	25.49
Bra032935.1-P	Field mustard	plastid	27.89	24.89
Bra011617.1-P	Field mustard	cytosol	27.14	23.63
Bra028680.1-P	Field mustard	cytosol	15.58	23.48
Bra005960.1-P	Field mustard	cytosol, mitochondrion, nucleus	15.33	23.28
Bra024514.1-P	Field mustard	cytosol	27.39	21.8
Bra037271.1-P	Field mustard	cytosol	25.63	19.81
Bra017712.1-P	Field mustard	nucleus	26.88	19.63
Bra021606.1-P	Field mustard	cytosol	15.08	16.53
Bra027245.1-P	Field mustard	nucleus	23.12	15.73
Bra034850.1-P	Field mustard	nucleus	2.26	14.29

Protein Annotations

EnsemblPlants:Bra013944.1	EnsemblPlants:Bra013944.1-P	EnsemblPlantsGene:Bra013944	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PANTHER:PTHR44997	PFAM:PF13855	PFscan:PS51450	SEG:seg	SMART:SM00364	SMART:SM00369
SUPFAM:SSF52058	UniParc:UPI0002546BE9	UniProt:M4DBT4	MapMan:35.1	:	:

Description

AT4G26050 (E=3e-123) | leucine-rich repeat family protein

Coordinates

chrA01:+:8633900..8636872

Molecular Weight (calculated)

43606.8 Da

IEP (calculated)

9.948

GRAVY (calculated)

-0.267

Length

398 amino acids

Sequence
(BLAST)

001: MMGYEHMNQM TMTTTGMMKN FNKVGPINIP RKKTTRRSVS AIDGGGAATA AAAGEGDRPQ DLKTLDLSGM SLASLSASSI NLASISKLDL SNNNIQQIPE
101: SLVARMLNLW TLDLHSNQLK TLPNSIGCLS KLKVLNVSGN NLQALPKTIE DCRSLEELNA NFNELTTLPD TIGFELTNLT KLSVNSNKLI VLPSSLGHLT
201: SLRVLDARLN HLGSLPEDLE NLVNLQVLNV SQNFQHLKTL PYSVGLLISL VELDVSYNGI KVLPDSIGCL RKIQKLSVEG NPLVSPPFEV VENGLEAVKQ
301: YMSEKMTESN KKTPTKKKLW GIGKMVKFKT FHGLSSSPGR SPGRRTGGDS HGDEREGFIN VSDYRQIDGI ASPRHVSLFN PRRLLSPLSA YFSPPRYR

Best Arabidopsis Sequence Match ( AT4G26050.1 )
(BLAST)

001: MMGYEQMNQM TMTTTAMMKN YNKKGLINTP QKKMTRRSVS AIDGGAAATA KEGDRRQNIK TLDLSGMSLA SLSASSINLA SISKLDLSNN NIQKIPESLV
101: ARMLNLWALD LQSNQLKTLP NSIGCLSKLK FLNVSGNYLQ SLPKTIEDCR SLEELNANFN ELTRLPDAIG FELTNLTKLS VNSNKLVLLP NSVSYLTSLR
201: VLDARLNRLS SLPEDLENLV NLQVLNVSQN FQHLTTLPYS VGLLISLVEL DVSYNGITVL PDSLGCLRRI QKLSVEGNPL ISPPFEVVEQ GLEALKQYMS
301: EKMTESYKKT PTKKKSWGIG KLVKYGLSSS PGRSTGREDG KEGFINVSDY RQIDGIASPR HVSLFNPRRL LSPLSAYFSP PRY

Arabidopsis Description

PIRL8Plant intracellular Ras-group-related LRR protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWE5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.