Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G430800.1 | Wheat | cytosol, nucleus, plastid | 98.08 | 98.89 |
| TraesCS2B01G454100.1 | Wheat | cytosol, nucleus, plastid | 98.08 | 98.89 |
| HORVU2Hr1G101090.6 | Barley | plastid | 96.71 | 83.65 |
| Os04t0605300-01 | Rice | nucleus | 75.62 | 78.41 |
| KXG27059 | Sorghum | cytosol, nucleus, plastid | 77.81 | 78.24 |
| Zm00001d002402_P001 | Maize | cytosol, nucleus, plastid | 76.71 | 77.14 |
| Zm00001d002399_P001 | Maize | nucleus | 50.96 | 74.1 |
| VIT_11s0052g00390.t01 | Wine grape | cytosol | 53.15 | 62.99 |
| GSMUA_AchrUn_... | Banana | nucleus | 56.99 | 61.18 |
| GSMUA_Achr1P23570_001 | Banana | nucleus | 56.99 | 60.64 |
| KRH37361 | Soybean | cytosol | 54.52 | 56.06 |
| KRH02753 | Soybean | cytosol | 53.42 | 54.17 |
| KRH12356 | Soybean | cytosol | 53.42 | 53.72 |
| Solyc12g017480.1.1 | Tomato | cytosol | 52.05 | 52.2 |
| PGSC0003DMT400016538 | Potato | mitochondrion | 51.78 | 52.07 |
| CDY30187 | Canola | nucleus | 38.9 | 50.9 |
| Bra024119.1-P | Field mustard | cytosol | 50.41 | 50.27 |
| AT4G26050.1 | Thale cress | cytosol | 52.6 | 50.13 |
| Bra013944.1-P | Field mustard | cytosol, plastid | 54.52 | 50.0 |
| CDX89369 | Canola | cytosol, plastid | 54.25 | 49.75 |
| CDY46713 | Canola | nucleus | 49.59 | 49.45 |
| CDY42760 | Canola | cytosol, plastid | 53.42 | 49.37 |
| Bra019126.1-P | Field mustard | cytosol, plastid | 53.42 | 49.37 |
| AT4G29880.1 | Thale cress | nucleus | 50.41 | 49.33 |
| CDX94383 | Canola | cytosol | 53.7 | 49.25 |
| CDX82667 | Canola | nucleus, plastid | 50.96 | 48.44 |
| Bra038857.1-P | Field mustard | nucleus, plastid | 50.96 | 48.44 |
| CDY39144 | Canola | nucleus, plastid | 50.96 | 48.44 |
| AT2G19330.1 | Thale cress | nucleus, plastid | 50.14 | 48.16 |
| CDX92748 | Canola | cytosol, plasma membrane, plastid | 49.32 | 48.13 |
| TraesCS2A01G327100.1 | Wheat | cytosol, plastid | 30.68 | 22.27 |
| TraesCS1A01G190500.1 | Wheat | cytosol | 28.77 | 19.66 |
| TraesCS7A01G247900.2 | Wheat | cytosol | 29.32 | 18.77 |
| TraesCS4A01G055400.1 | Wheat | nucleus | 16.71 | 17.99 |
| TraesCS1A01G142500.1 | Wheat | cytosol | 17.81 | 17.43 |
| TraesCS6A01G410200.1 | Wheat | cytosol, plasma membrane, plastid | 22.47 | 12.65 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G432800.1 | EnsemblPlantsGene:TraesCS2A01G432800 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PANTHER:PTHR44997 |
| PFAM:PF00560 | PFAM:PF13855 | PFscan:PS51450 | PRINTS:PR00019 | SEG:seg | SMART:SM00364 |
| SMART:SM00369 | SUPFAM:SSF52058 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2A:+:686170593..686172445
Molecular Weight (calculated)
40236.6 Da
IEP (calculated)
9.465
GRAVY (calculated)
-0.304
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDMAERRSR HGHGHGHGHA NVVPFGAGAG GGLQHGEHEQ EVKEKKLDMS GLSMDTIPHL TMSLGHITTL DLSNNNLESI PESMIARLLN VVVLDVRSNQ
101: LKSLPNSIGC LSKLRVLNVS GNLLQSLPAT IEECRALEEL NANFNQLTRL PDTLGFELHS LRRLSVNSNK LTSLPFSTSH MTALRALDAR LNCIRALPEG
201: LENLVNLEVL NVSQNFHFLR ELPYGLGLLT SLRELDISYN SISVLPDSMG CLAKLNKFSA VGNPLVCPPM DIVEQSLDAM RTYLSSRMNG TGVNAKKKKG
301: WLPRMVKYNT FSGRMTPGRK SAHDNSEGFS MSDYHSLNGS ASPGFLSMLS PRRLFSPRRD SPKHH
101: LKSLPNSIGC LSKLRVLNVS GNLLQSLPAT IEECRALEEL NANFNQLTRL PDTLGFELHS LRRLSVNSNK LTSLPFSTSH MTALRALDAR LNCIRALPEG
201: LENLVNLEVL NVSQNFHFLR ELPYGLGLLT SLRELDISYN SISVLPDSMG CLAKLNKFSA VGNPLVCPPM DIVEQSLDAM RTYLSSRMNG TGVNAKKKKG
301: WLPRMVKYNT FSGRMTPGRK SAHDNSEGFS MSDYHSLNGS ASPGFLSMLS PRRLFSPRRD SPKHH
001: MMGYEQMNQM TMTTTAMMKN YNKKGLINTP QKKMTRRSVS AIDGGAAATA KEGDRRQNIK TLDLSGMSLA SLSASSINLA SISKLDLSNN NIQKIPESLV
101: ARMLNLWALD LQSNQLKTLP NSIGCLSKLK FLNVSGNYLQ SLPKTIEDCR SLEELNANFN ELTRLPDAIG FELTNLTKLS VNSNKLVLLP NSVSYLTSLR
201: VLDARLNRLS SLPEDLENLV NLQVLNVSQN FQHLTTLPYS VGLLISLVEL DVSYNGITVL PDSLGCLRRI QKLSVEGNPL ISPPFEVVEQ GLEALKQYMS
301: EKMTESYKKT PTKKKSWGIG KLVKYGLSSS PGRSTGREDG KEGFINVSDY RQIDGIASPR HVSLFNPRRL LSPLSAYFSP PRY
101: ARMLNLWALD LQSNQLKTLP NSIGCLSKLK FLNVSGNYLQ SLPKTIEDCR SLEELNANFN ELTRLPDAIG FELTNLTKLS VNSNKLVLLP NSVSYLTSLR
201: VLDARLNRLS SLPEDLENLV NLQVLNVSQN FQHLTTLPYS VGLLISLVEL DVSYNGITVL PDSLGCLRRI QKLSVEGNPL ISPPFEVVEQ GLEALKQYMS
301: EKMTESYKKT PTKKKSWGIG KLVKYGLSSS PGRSTGREDG KEGFINVSDY RQIDGIASPR HVSLFNPRRL LSPLSAYFSP PRY
Arabidopsis Description
PIRL8Plant intracellular Ras-group-related LRR protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWE5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.