Factsheet for AT2G19330.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038857.1-P	Field mustard	nucleus, plastid	92.89	91.93
CDX82667	Canola	nucleus, plastid	92.89	91.93
CDY39144	Canola	nucleus, plastid	92.89	91.93
AT4G29880.1	Thale cress	nucleus	79.47	80.97
VIT_11s0052g00390.t01	Wine grape	cytosol	57.89	71.43
KRH02753	Soybean	cytosol	62.63	66.11
KRH37361	Soybean	cytosol	58.42	62.54
GSMUA_AchrUn_...	Banana	nucleus	55.53	62.06
PGSC0003DMT400016538	Potato	mitochondrion	59.21	61.98
GSMUA_Achr1P23570_001	Banana	nucleus	55.53	61.52
KRH12356	Soybean	cytosol	57.37	60.06
Solyc12g017480.1.1	Tomato	cytosol	57.37	59.89
AT4G26050.1	Thale cress	cytosol	56.05	55.61
Os04t0605300-01	Rice	nucleus	50.79	54.83
Zm00001d002399_P001	Maize	nucleus	35.79	54.18
KXG27059	Sorghum	cytosol, nucleus, plastid	50.0	52.34
Zm00001d002402_P001	Maize	cytosol, nucleus, plastid	50.0	52.34
TraesCS2A01G432800.1	Wheat	cytosol, nucleus, plastid	48.16	50.14
TraesCS2D01G430800.1	Wheat	cytosol, nucleus, plastid	47.63	50.0
TraesCS2B01G454100.1	Wheat	cytosol, nucleus, plastid	47.37	49.72
HORVU2Hr1G101090.6	Barley	plastid	48.68	43.84
AT5G05850.1	Thale cress	plastid	34.47	25.89
AT3G11330.1	Thale cress	plastid	33.95	25.85
AT1G12970.1	Thale cress	cytosol	29.21	23.92
AT3G26500.1	Thale cress	cytosol	29.21	23.57
AT5G07910.1	Thale cress	cytosol	14.74	21.37
AT2G17440.1	Thale cress	cytosol	26.32	19.01
AT4G35470.1	Thale cress	nucleus	26.84	18.58
AT3G15410.2	Thale cress	cytosol, mitochondrion, nucleus	23.95	15.42
AT2G30105.1	Thale cress	cytosol	15.0	15.24

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:816450	UniProt:A0A178VST5	ProteinID:AAC16463.1	ProteinID:AEC06869.1
ArrayExpress:AT2G19330	EnsemblPlantsGene:AT2G19330	RefSeq:AT2G19330	TAIR:AT2G19330	RefSeq:AT2G19330-TAIR-G	EnsemblPlants:AT2G19330.1
TAIR:AT2G19330.1	EMBL:AY849576	Unigene:At.51204	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
RefSeq:NP_179523.1	UniProt:O64566	ProteinID:OAP09510.1	PFAM:PF13855	Symbol:PIRL6	PO:PO:0001016
PO:PO:0001017	PO:PO:0007611	PO:PO:0007616	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PFscan:PS51450	PANTHER:PTHR44997
SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI00000A4888	SEG:seg	:

Description

PIRL6Plant intracellular Ras-group-related LRR protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O64566]

Coordinates

chr2:+:8372861..8374453

Molecular Weight (calculated)

42813.8 Da

IEP (calculated)

9.663

GRAVY (calculated)

-0.352

Length

380 amino acids

Sequence
(BLAST)

001: MICEEAYHQQ PQIQKEQMMT MDQRNNHQRK RSPLSSPSSP SSPSSPSSPK SPSFNNNEEE RLEVVNLSGM ALESLPNPSL NLAQICKLDL SNNHLQTIPE
101: SLTARLLNLI ALDVHSNQIK ALPNSIGCLS KLKTLNVSGN FLVSFPKSIQ HCRSLEELNA NFNKLIRLPD SIGFELTNLR KLSINSNKLI SLPISITHLT
201: SLRVLDARLN CLMILPDDLE NLINLEILNV SQNFQYLSAL PSSIGLLMNL IELDVSYNKI TVLPESIGCM RRLRKLSVEG NPLVSPPIEV MEQNLQVVRE
301: YLTQKMNGGS PRSPSKKKSW GFGKLVKYGT FNGGSRSWNR EEREGFIMPE YRSIDSLASP RYSGMFSPRR LFSPRTYFSR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.