Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69629 | Canola | cytosol | 59.66 | 82.65 |
| Bra032935.1-P | Field mustard | plastid | 77.49 | 81.84 |
| CDY48988 | Canola | cytosol | 82.17 | 81.82 |
| AT1G12970.1 | Thale cress | cytosol | 66.67 | 67.67 |
| KRH74520 | Soybean | cytosol | 50.11 | 51.19 |
| GSMUA_Achr1P13500_001 | Banana | plastid | 48.83 | 47.03 |
| HORVU7Hr1G066320.3 | Barley | cytosol | 26.96 | 45.36 |
| GSMUA_Achr8P28520_001 | Banana | cytosol, nucleus, plastid | 46.5 | 43.71 |
| AT5G05850.1 | Thale cress | plastid | 44.37 | 41.3 |
| HORVU2Hr1G082540.6 | Barley | cytosol, mitochondrion | 35.88 | 41.22 |
| AT3G11330.1 | Thale cress | plastid | 43.52 | 41.08 |
| Zm00001d025681_P001 | Maize | plasma membrane | 43.74 | 41.04 |
| TraesCS2B01G354900.1 | Wheat | plastid | 43.31 | 40.64 |
| TraesCS2A01G327100.1 | Wheat | cytosol, plastid | 43.31 | 40.56 |
| TraesCS2D01G335800.1 | Wheat | cytosol, plastid | 43.1 | 40.44 |
| EES10994 | Sorghum | plastid | 43.31 | 39.92 |
| Os02t0593600-01 | Rice | plasma membrane | 41.83 | 39.32 |
| EES05350 | Sorghum | plastid | 41.19 | 38.57 |
| TraesCS6D01G191800.1 | Wheat | plastid | 40.34 | 38.54 |
| HORVU6Hr1G053210.1 | Barley | cytosol, plastid | 40.13 | 36.63 |
| Zm00001d017071_P002 | Maize | plastid | 40.98 | 36.48 |
| AT2G19330.1 | Thale cress | nucleus, plastid | 23.57 | 29.21 |
| AT4G29880.1 | Thale cress | nucleus | 22.51 | 28.42 |
| AT4G26050.1 | Thale cress | cytosol | 22.08 | 27.15 |
| AT5G07910.1 | Thale cress | cytosol | 13.59 | 24.43 |
| AT2G17440.1 | Thale cress | cytosol | 26.54 | 23.76 |
| AT4G35470.1 | Thale cress | nucleus | 26.75 | 22.95 |
| AT2G30105.1 | Thale cress | cytosol | 16.56 | 20.86 |
| AT3G15410.2 | Thale cress | cytosol, mitochondrion, nucleus | 19.75 | 15.76 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:822257 | UniProt:A0A178VDK6 | ProteinID:AEE77167.1 | EMBL:AK119000 |
| ArrayExpress:AT3G26500 | EnsemblPlantsGene:AT3G26500 | RefSeq:AT3G26500 | TAIR:AT3G26500 | RefSeq:AT3G26500-TAIR-G | EnsemblPlants:AT3G26500.1 |
| TAIR:AT3G26500.1 | EMBL:AY849572 | ProteinID:BAB01830.1 | EMBL:BT006050 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0008150 | InterPro:IPR001611 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | RefSeq:NP_189281.2 | ProteinID:OAP04517.1 | PFAM:PF13855 |
| Symbol:PIRL2 | PO:PO:0000293 | PRINTS:PR00019 | PFscan:PS51450 | PANTHER:PTHR44373 | PANTHER:PTHR44373:SF1 |
| UniProt:Q9LRV8 | SMART:SM00364 | SMART:SM00365 | SMART:SM00369 | SUPFAM:SSF52058 | UniParc:UPI00000ABF9C |
Description
PIRL2Plant intracellular Ras-group-related LRR protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRV8]
Coordinates
chr3:-:9707912..9710100
Molecular Weight (calculated)
52599.5 Da
IEP (calculated)
4.558
GRAVY (calculated)
-0.283
Length
471 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHDLDKFPL LSYVLHQHDS NLHAPPSMAA QETLLPSFPL LSNPEIMSML TQSIPTTITQ TLFVFNSLGS RPDPLAVSSA RFKIAQIMDS LSPEEAAKES
101: EIYAGVVRLD EVHDSYEKKL KDTEEELSRV YSTEVESMLR SGEEVNEKVL AVLKEAESGG TVERIDLSSQ ELKLIPEAFW KVVGLVYLNL SGNDLTFIPD
201: AISKLKKLEE LDVSSNSLES LPDSIGMLLN LRILNVNANN LTALPESIAH CRSLVELDAS YNNLTSLPTN IGYGLQNLER LSIQLNKLRY FPGSISEMYN
301: LKYLDAHMNE IHGIPNSIGR LTKLEVLNLS SNFNNLMGVP DTITDLTNLR ELDLSNNQIQ AIPDSFYRLR KLEKLNLDQN PLEIPSQEVA TQGAEVVREF
401: MRKRWGDIMA EQQQRIGVEA ERHGDENGWV YWGTSMVTNL VSGVTHTIGF GGATSDGGDK KPGDSYFYHQ I
101: EIYAGVVRLD EVHDSYEKKL KDTEEELSRV YSTEVESMLR SGEEVNEKVL AVLKEAESGG TVERIDLSSQ ELKLIPEAFW KVVGLVYLNL SGNDLTFIPD
201: AISKLKKLEE LDVSSNSLES LPDSIGMLLN LRILNVNANN LTALPESIAH CRSLVELDAS YNNLTSLPTN IGYGLQNLER LSIQLNKLRY FPGSISEMYN
301: LKYLDAHMNE IHGIPNSIGR LTKLEVLNLS SNFNNLMGVP DTITDLTNLR ELDLSNNQIQ AIPDSFYRLR KLEKLNLDQN PLEIPSQEVA TQGAEVVREF
401: MRKRWGDIMA EQQQRIGVEA ERHGDENGWV YWGTSMVTNL VSGVTHTIGF GGATSDGGDK KPGDSYFYHQ I
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.