Factsheet for HORVU6Hr1G053210.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G191800.1	Wheat	plastid	86.82	90.87
Os02t0593600-01	Rice	plasma membrane	70.35	72.46
EES05350	Sorghum	plastid	68.41	70.18
Zm00001d017071_P002	Maize	plastid	68.6	66.92
GSMUA_Achr1P13500_001	Banana	plastid	52.52	55.42
HORVU7Hr1G066320.3	Barley	cytosol	29.84	55.0
HORVU2Hr1G082540.6	Barley	cytosol, mitochondrion	42.83	53.9
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	52.33	53.89
CDX73881	Canola	cytosol	44.77	53.72
CDY00732	Canola	cytosol	44.77	53.72
CDY01012	Canola	plastid	49.03	52.93
Bra034849.1-P	Field mustard	plastid	50.19	52.11
CDY08535	Canola	plastid	50.0	51.91
CDX70122	Canola	cytosol	48.45	51.76
CDX98871	Canola	cytosol	48.45	51.76
Bra001399.1-P	Field mustard	plastid	48.45	50.2
AT3G11330.1	Thale cress	plastid	48.26	49.9
Bra009140.1-P	Field mustard	cytosol	48.45	49.6
AT5G05850.1	Thale cress	plastid	47.87	48.81
KRH74520	Soybean	cytosol	43.02	48.16
VIT_17s0000g09230.t01	Wine grape	cytosol	41.86	48.11
KRH57134	Soybean	plastid	47.09	47.55
Solyc03g112270.2.1	Tomato	cytosol, nucleus, plastid	48.06	47.15
KRH63625	Soybean	nucleus	46.71	46.98
PGSC0003DMT400046655	Potato	cytosol	47.48	46.58
AT1G12970.1	Thale cress	cytosol	40.7	45.26
CDY16042	Canola	cytosol	40.5	45.14
CDY26604	Canola	cytosol	40.5	45.14
Bra026944.1-P	Field mustard	cytosol	40.5	45.14
CDY69629	Canola	cytosol	28.49	43.24
Bra032935.1-P	Field mustard	plastid	36.43	42.15
CDY48988	Canola	cytosol	37.6	41.01
AT3G26500.1	Thale cress	cytosol	36.63	40.13
HORVU4Hr1G068710.2	Barley	cytosol, mitochondrion, nucleus, plastid	14.34	28.24
HORVU2Hr1G101090.6	Barley	plastid	22.67	27.73
HORVU1Hr1G049900.1	Barley	cytosol, extracellular, mitochondrion, plastid	24.61	22.16
HORVU6Hr1G093360.11	Barley	nucleus	15.89	22.1
HORVU1Hr1G037810.14	Barley	cytosol, nucleus, peroxisome	15.7	21.72
HORVU6Hr1G093540.7	Barley	cytosol	1.74	3.77

Protein Annotations

EnsemblPlants:HORVU6Hr1G053210.1	EnsemblPlantsGene:HORVU6Hr1G053210	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	ncoils:Coil
PANTHER:PTHR44373	PANTHER:PTHR44373:SF2	PFAM:PF13855	PFscan:PS51450	SEG:seg	SMART:SM00364
SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI000B4845B3	UniProt:A0A287U6R4	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr6H:-:329680679..329683173

Molecular Weight (calculated)

56687.7 Da

IEP (calculated)

5.784

GRAVY (calculated)

-0.332

Length

516 amino acids

Sequence
(BLAST)

001: EFRSPASASS RNLHSAAAMD PSPNSHPILS YVLSRLPSIK TGSPRLSSPR DLEQPPPPSP SPRAPSGPAE FELVERMPGL RHPSVLASMT RAVADITCAR
101: DAIRHLGPRP DHELLDSSRA FLLSYSHGNL AGLGNQEEIY EKVVASQELL RLDEEHEAYG ALLRQAEEKL ERVYRMAMHG RDVVGGGGNR GEDEGSGGVD
201: EEVVRLLKQA EEGRAVEQVR LADRQLRHLP EPLGRIRGLL VLDVSRNHLQ AVPDAIGGLE HLEELRLASN VLVSLPDSIG LLSNLKVLDV SGNKLRSLPD
301: SISKCRSLVE LDASYNVLAY LPTGIGHELV NLQKLWVQLN KLRQLPSSIC EMRSLRLLDA HFNELRGLPS SFGKLVALES LNLSSNFSDM RDLPASFGDL
401: VGLRDLDLSN NQIHALPDCF GRMDRLERLC VDQNPLVVPP MEVVAKGVGA VREYMDKRLQ AEEERRKSAA VAAESPKPSS PIAWLSRSMS SLSTWVSDVA
501: GPEKAPEEDK FLEQEL

Best Arabidopsis Sequence Match ( AT3G11330.1 )
(BLAST)

001: MAAEPNPKNF PVLSYVLARL PSFTAKSPSS SVPPFDIEQP PPSSSSSSIE IVTQMPHLTQ PDVLASMTSA ISDVAETRSI LRTLGPRPDH ESVDKARAKL
101: SEIESFLSES FEDIALTDAA AKDEKRRQEM DQEKTWCESI LKLDEVHASY EKLLKEAEER LVRIYESAEK NAAEDEENVA AVEVNEEVVG ILQHASANPV
201: DRVDLSGRKL RLLPEAFGRI QGLLVLNLSN NKLESIPDSI AGLHSLVELD VSTNSLETLP DSIGLLSKLK ILNVSTNKLT SLPDSICRCG SLVILDVSFN
301: RLTYLPTNIG PELVNLEKLL VQYNKIRSFP TSIGEMRSLK HLDAHFNELN GLPDSFVLLT NLEYLNLSSN FSDLKDLPFS FGELISLQEL DLSNNQIHAL
401: PDTFGTLDSL TKLNVDQNPL VVPPEEVVKE GVEAVKTYMG QRRISMLEEE EKKKMEEEME QANAGWLTRT TSKLKTYVAD VSEYLGSNSP RDPYLERQL

Arabidopsis Description

PIRL9Plant intracellular Ras-group-related LRR protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.