Factsheet for TraesCS6D01G191800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G053210.1	Barley	cytosol, plastid	90.87	86.82
Os02t0593600-01	Rice	plasma membrane	72.82	71.66
EES05350	Sorghum	plastid	70.79	69.38
Zm00001d017071_P002	Maize	plastid	71.2	66.35
TraesCS2D01G335800.1	Wheat	cytosol, plastid	64.91	63.74
GSMUA_Achr1P13500_001	Banana	plastid	55.38	55.83
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	54.77	53.89
CDX73881	Canola	cytosol	46.65	53.49
CDY00732	Canola	cytosol	46.65	53.49
CDY01012	Canola	plastid	50.71	52.3
CDX70122	Canola	cytosol	50.91	51.97
CDX98871	Canola	cytosol	50.91	51.97
Bra034849.1-P	Field mustard	plastid	51.93	51.51
CDY08535	Canola	plastid	51.52	51.11
Bra001399.1-P	Field mustard	plastid	50.51	50.0
Bra009140.1-P	Field mustard	cytosol	50.91	49.8
AT5G05850.1	Thale cress	plastid	50.91	49.6
AT3G11330.1	Thale cress	plastid	50.1	49.5
KRH74520	Soybean	cytosol	46.25	49.46
VIT_17s0000g09230.t01	Wine grape	cytosol	44.83	49.22
Solyc03g112270.2.1	Tomato	cytosol, nucleus, plastid	51.32	48.1
KRH57134	Soybean	plastid	49.29	47.55
KRH63625	Soybean	nucleus	49.29	47.37
PGSC0003DMT400046655	Potato	cytosol	50.51	47.34
CDY26604	Canola	cytosol	43.41	46.22
CDY16042	Canola	cytosol	43.41	46.22
Bra026944.1-P	Field mustard	cytosol	43.41	46.22
AT1G12970.1	Thale cress	cytosol	42.8	45.47
CDY69629	Canola	cytosol	29.61	42.94
Bra032935.1-P	Field mustard	plastid	38.74	42.83
CDY48988	Canola	cytosol	39.96	41.65
AT3G26500.1	Thale cress	cytosol	38.54	40.34
TraesCS2D01G430800.1	Wheat	cytosol, nucleus, plastid	23.33	31.77
TraesCS4D01G249500.1	Wheat	cytosol, mitochondrion	14.2	26.72
TraesCS1D01G194700.1	Wheat	cytosol	27.59	25.52
TraesCS7D01G246700.1	Wheat	nucleus	26.98	23.33
TraesCS1D01G141500.1	Wheat	cytosol	16.84	22.25
TraesCS6D01G393300.1	Wheat	cytosol	18.26	15.36

Protein Annotations

EnsemblPlants:TraesCS6D01G191800.1	EnsemblPlantsGene:TraesCS6D01G191800	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PANTHER:PTHR44373
PANTHER:PTHR44373:SF2	PFAM:PF13855	PFscan:PS51450	PRINTS:PR00019	SEG:seg	SMART:SM00364
SMART:SM00369	SUPFAM:SSF52058	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr6D:+:264617280..264619189

Molecular Weight (calculated)

54371.3 Da

IEP (calculated)

5.202

GRAVY (calculated)

-0.210

Length

493 amino acids

Sequence
(BLAST)

001: MDPSPNSHPI LSYVLSRLPS IKTGSLRLSS PHDLEQPPPP SPSPRAPSGP AEFELVERMP GLRHPSVLRF LTRAVADITC ARDALRHLGP RPDHELVDSA
101: RAFLLSHSHG NLVGLDIEEK VVESLEVVRL DEEHEAYGVL LREAEEKLEL VYRMAMHGRD VAEGGGERRE DEGSGDVDEE VVRLLKQAQE GRVVEQVRLA
201: DRQLLHLPEP LGRIRGLLVL DVSRNQLQAV PDAIGGLQHL EELRLASNVL VSLPDSIGLL SNLKVLDVSS NKLRSLPDSI SRCGSLVELD ASCNVLAYLP
301: TGIGYELVNL QKLWVHLNKL RSLPSSICEM RSLRLLDVHF NELRGLPSSF GKLVALESLN LSSNFSDMRD LPASFGDLVG LRELDLSNNQ IHALPDCFGR
401: LDRLERLCLD QNPLVVPPLE VVAKGVGAVR EYMDKRLQAE EERRKSAVAA GSPKASSPIA WLSRSVSSLS TWVSDVAGPE KAVEEDKFLE QEL

Best Arabidopsis Sequence Match ( AT5G05850.1 )
(BLAST)

001: MATELNPKNF PVLSYVLDRL PSFTAKSSSS SDVEPPPSKS DPSSSSNHSI EIVTQMPHLA HPDVLASMTN ATADVSQTRS VLRTLGPRPD HETVDRARAR
101: LREIDASLSE SFEEIALSPN DIDVAEKEQK RREAVEQEKI WYKSILKLNE LHESYEKLLK EAEERLVRIY ESAEKNAAAV AEEEAAEVEV NEEVVSILQQ
201: AAENPLDRVD LSGRKLKLLP EAFGKIQGLL VLNLYNNQLQ AIPDSIAGLH NLLELDVSTN FLETLPDSIG LLSKLKILNV SCNKLTTLPD SICHCGSLVV
301: LDASYNNLTY LPTNIGFELV KLEKLLIHLN KIRSLPTSIG EMRSLRYLDA HFNELNGLPN SFGLLTNLEY LNLSSNFSDL QDLPASFGDL ISLQELDLSN
401: NQIHSLPDAF GTLVNLTKLN LDQNPLVVPP DEVVKQGVDA VKMYMGKRWV SMLEEEEKMA NMKDEMDQTN TDWLTRTTSK LKTYVTEVSE YLGSNPPRDP
501: YLDQQL

Arabidopsis Description

PIRL1Plant intracellular Ras-group-related LRR protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFJ3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.