Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G456300.1 | Wheat | cytosol | 96.59 | 96.75 |
| HORVU6Hr1G093360.11 | Barley | nucleus | 59.9 | 94.61 |
| TraesCS6A01G410200.1 | Wheat | cytosol, plasma membrane, plastid | 97.61 | 88.27 |
| EES07794 | Sorghum | cytosol | 84.3 | 84.3 |
| Os02t0826600-01 | Rice | cytosol | 81.23 | 81.23 |
| Zm00001d018525_P004 | Maize | cytosol | 84.3 | 79.17 |
| GSMUA_Achr4P04360_001 | Banana | cytosol | 69.8 | 69.91 |
| KRH22120 | Soybean | cytosol | 65.02 | 65.35 |
| KRH27219 | Soybean | cytosol | 65.19 | 65.19 |
| VIT_19s0014g03000.t01 | Wine grape | cytosol, mitochondrion | 64.16 | 64.38 |
| Solyc10g006930.2.1 | Tomato | cytosol | 63.31 | 63.53 |
| Bra027245.1-P | Field mustard | nucleus | 63.31 | 63.42 |
| CDY56828 | Canola | nucleus | 63.14 | 63.25 |
| CDX97667 | Canola | nucleus | 62.97 | 63.08 |
| AT3G15410.2 | Thale cress | cytosol, mitochondrion, nucleus | 63.14 | 62.71 |
| TraesCS4D01G249500.1 | Wheat | cytosol, mitochondrion | 11.6 | 25.95 |
| TraesCS2D01G430800.1 | Wheat | cytosol, nucleus, plastid | 14.33 | 23.2 |
| TraesCS2D01G335800.1 | Wheat | cytosol, plastid | 15.87 | 18.53 |
| TraesCS1D01G141500.1 | Wheat | cytosol | 11.77 | 18.5 |
| TraesCS6D01G191800.1 | Wheat | plastid | 15.36 | 18.26 |
| TraesCS7D01G246700.1 | Wheat | nucleus | 15.7 | 16.14 |
| TraesCS1D01G194700.1 | Wheat | cytosol | 14.68 | 16.14 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G393300.1 | EnsemblPlantsGene:TraesCS6D01G393300 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | ncoils:Coil |
| PANTHER:PTHR44126 | PFAM:PF13855 | PFscan:PS51450 | PRINTS:PR00019 | SEG:seg | SMART:SM00364 |
| SMART:SM00369 | SUPFAM:SSF52058 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6D:-:467187944..467194309
Molecular Weight (calculated)
63953.6 Da
IEP (calculated)
6.397
GRAVY (calculated)
-0.072
Length
586 amino acids
Sequence
(BLAST)
(BLAST)
001: MERILKSARE SGSLNLSNRS LSEVPGEVYN NLDTGSLDDK WWEGVDLQKL ILAHNNLEVL REDLRNLSSL VVLNISHNQL SSVPAAIGDL PLLKSLDVSF
101: NQIKFIPEEV GLATALVKVD FSNNCLTELP ASLGRCLNLS ELKASNNNIS RLPDELAGCC KLSKFDLEGN KLVLLPENMF TSWTLLTELN AAKNQLTTIP
201: ASIGALSKLV RMDLHQNKIT SIPSSIKGCS SLAEFYMGNN LLSTIPDDIG MLSKLGTLDL HSNQMKEYPV GACKLKLSFL DLSNNALSGL PPELGTMTTL
301: RKLLLSGNPM RALRSSLVSG PTSTLMKYLR SRLSSEEEAS GSRATPTKVD QISAARRLSV SSKELNLSGL GVPNVPPAAW ETSDVVKLDL SKNLIEDLPN
401: ELSLCSSLQA LILSNNKIKK WPGMVVSSLP SLTSLKLDNN PLAEISPTDL ESLSKLEILD LSGNASSLSE PSVVSSLPQL QELYLRRMKL QEFPIGLVQL
501: KHLRILNLSQ NNLTTIPEGI KDFSALIELD LSDNNITRLP AELGLLEPSL QVLKLDGNPL RSIRRTVLER GTKAVLSYLK EKLPSN
101: NQIKFIPEEV GLATALVKVD FSNNCLTELP ASLGRCLNLS ELKASNNNIS RLPDELAGCC KLSKFDLEGN KLVLLPENMF TSWTLLTELN AAKNQLTTIP
201: ASIGALSKLV RMDLHQNKIT SIPSSIKGCS SLAEFYMGNN LLSTIPDDIG MLSKLGTLDL HSNQMKEYPV GACKLKLSFL DLSNNALSGL PPELGTMTTL
301: RKLLLSGNPM RALRSSLVSG PTSTLMKYLR SRLSSEEEAS GSRATPTKVD QISAARRLSV SSKELNLSGL GVPNVPPAAW ETSDVVKLDL SKNLIEDLPN
401: ELSLCSSLQA LILSNNKIKK WPGMVVSSLP SLTSLKLDNN PLAEISPTDL ESLSKLEILD LSGNASSLSE PSVVSSLPQL QELYLRRMKL QEFPIGLVQL
501: KHLRILNLSQ NNLTTIPEGI KDFSALIELD LSDNNITRLP AELGLLEPSL QVLKLDGNPL RSIRRTVLER GTKAVLSYLK EKLPSN
001: MDRILKAART SGSLNLSNRS LKDVPTEVYQ CLETTGEGEN WWEAVDLQKL ILAHNDIEVL REDLKNLACL VVLNVSHNKL SQLPAAIGEL TAMKSLDVSF
101: NSISELPEQI GSAISLVKLD CSSNRLKELP DSIGRCLDLS DLKATNNQIS SLPEDMVNCS KLSKLDVEGN KLTALSENHI ASWTMLAELN ACKNMLGVLP
201: QNIGSLSRLI RLDLHQNKIS SVPPSIGGCS SLVEFYLGIN SLSTLPAEIG DLSRLGTLDL RSNQLKEYPV GACKLKLSYL DLSNNSLTGL HPELGNMTTL
301: RKLVLVGNPL RTLRSSLVNG PTAALLKYLR SRLSNSEETS ASTPTKENVI ASAARMSISS KELSLEGLNL SDVPSEVWES GEITKVNLSK NSIEELPAQL
401: STSVSLQTLI LSRNKIKDWP GAILKSLPNL MCLKLDNNPL NQIPLDGFQV VSGLQILDLS VNAVSFREHP KFCHLPQLRE LYLSRIQLSE VPEDILNLSN
501: LIILDLNQNS LQSIPKGIKN MTSLKHLDIS NNNISSLPPE LGLLEPTLEV LRLDGNPLRS IRRPILERGT KAVLNYLKDR LPDQ
101: NSISELPEQI GSAISLVKLD CSSNRLKELP DSIGRCLDLS DLKATNNQIS SLPEDMVNCS KLSKLDVEGN KLTALSENHI ASWTMLAELN ACKNMLGVLP
201: QNIGSLSRLI RLDLHQNKIS SVPPSIGGCS SLVEFYLGIN SLSTLPAEIG DLSRLGTLDL RSNQLKEYPV GACKLKLSYL DLSNNSLTGL HPELGNMTTL
301: RKLVLVGNPL RTLRSSLVNG PTAALLKYLR SRLSNSEETS ASTPTKENVI ASAARMSISS KELSLEGLNL SDVPSEVWES GEITKVNLSK NSIEELPAQL
401: STSVSLQTLI LSRNKIKDWP GAILKSLPNL MCLKLDNNPL NQIPLDGFQV VSGLQILDLS VNAVSFREHP KFCHLPQLRE LYLSRIQLSE VPEDILNLSN
501: LIILDLNQNS LQSIPKGIKN MTSLKHLDIS NNNISSLPPE LGLLEPTLEV LRLDGNPLRS IRRPILERGT KAVLNYLKDR LPDQ
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4IYR7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.