Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G143600.3 | Wheat | nucleus | 96.49 | 97.0 |
| TraesCS7A01G247900.2 | Wheat | cytosol | 96.14 | 96.14 |
| Zm00001d031470_P001 | Maize | plasma membrane | 76.32 | 75.39 |
| EES14257 | Sorghum | nucleus | 75.09 | 74.05 |
| Os08t0511700-00 | Rice | plasma membrane | 74.04 | 73.52 |
| CDX72539 | Canola | nucleus | 42.11 | 61.07 |
| GSMUA_Achr8P25490_001 | Banana | nucleus | 58.42 | 60.22 |
| GSMUA_Achr5P23850_001 | Banana | cytosol | 57.37 | 59.35 |
| KRH76512 | Soybean | nucleus | 56.84 | 56.45 |
| KRH28950 | Soybean | cytosol | 56.14 | 56.44 |
| VIT_07s0031g02310.t01 | Wine grape | cytosol | 54.74 | 56.01 |
| Bra011617.1-P | Field mustard | cytosol | 44.56 | 55.58 |
| CDX75505 | Canola | cytosol | 52.46 | 55.37 |
| CDX69142 | Canola | cytosol | 52.28 | 54.78 |
| AT4G35470.1 | Thale cress | nucleus | 52.46 | 54.46 |
| KRH39397 | Soybean | nucleus | 52.28 | 54.08 |
| CDY40632 | Canola | nucleus | 51.4 | 53.76 |
| Bra017712.1-P | Field mustard | nucleus | 51.4 | 53.76 |
| KRH07815 | Soybean | cytosol | 51.58 | 53.65 |
| CDY66405 | Canola | cytosol | 47.02 | 53.6 |
| Bra024514.1-P | Field mustard | cytosol | 46.67 | 53.2 |
| CDY07843 | Canola | nucleus | 46.32 | 52.8 |
| PGSC0003DMT400059678 | Potato | nucleus | 52.11 | 52.2 |
| AT2G17440.1 | Thale cress | cytosol | 47.72 | 51.71 |
| CDY30364 | Canola | cytosol | 46.32 | 51.66 |
| Bra037271.1-P | Field mustard | cytosol | 46.67 | 51.65 |
| CDY26809 | Canola | nucleus | 47.19 | 50.37 |
| Solyc02g082350.2.1 | Tomato | nucleus | 50.88 | 50.26 |
| PGSC0003DMT400035497 | Potato | cytosol | 50.35 | 50.17 |
| TraesCS1D01G194700.1 | Wheat | cytosol | 44.04 | 47.09 |
| TraesCS4D01G249500.1 | Wheat | cytosol, mitochondrion | 13.86 | 30.15 |
| TraesCS2D01G430800.1 | Wheat | cytosol, nucleus, plastid | 18.25 | 28.73 |
| TraesCS6D01G191800.1 | Wheat | plastid | 23.33 | 26.98 |
| GSMUA_Achr6P03430_001 | Banana | nucleus | 22.11 | 26.69 |
| TraesCS2D01G335800.1 | Wheat | cytosol, plastid | 23.33 | 26.49 |
| TraesCS1D01G141500.1 | Wheat | cytosol | 13.68 | 20.91 |
| TraesCS6D01G393300.1 | Wheat | cytosol | 16.14 | 15.7 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G246700.1 | EnsemblPlantsGene:TraesCS7D01G246700 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PANTHER:PTHR44513 |
| PANTHER:PTHR44513:SF1 | PFAM:PF00560 | PFAM:PF13855 | PFscan:PS51450 | SEG:seg | SMART:SM00364 |
| SMART:SM00369 | SUPFAM:SSF52058 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr7D:-:215938575..215941196
Molecular Weight (calculated)
61676.1 Da
IEP (calculated)
6.909
GRAVY (calculated)
-0.179
Length
570 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAAAAAFG TLEGVVGEIT RLHRSLPARP TLDDVEAAEA LARAADREER ARLDAVEALR RSPLVPEELF YVAQEMHRAL TGFHCREQKR DATRILELDA
101: LHALFDDLIQ RASQCVPSTS TGAAPRTTST AAAGAASSSS ASSAGPLPAA GRSSLVTNGF SAERTVGTSM GRVSMDDSYV KKAKAPMWDG GLVAASPRKP
201: GGTAAANSAA VRLDDSYGDD KLKMSLIKLA SMIEVAAKTG ARELNFKGKL MAQIEWIPDS IGKLNGLVTL DISENRLVAL PPTIGKLSSL TKLDLHANRI
301: AQLPDSVGDL RSLLCLDLRG NQLTSLPSRI GRLANLEELD VGANHIVSLP DSVGSLTRLK KLLVETNDLD ELPYTIGHCV SLVELQAGYN HLKALPEAVG
401: KLESLEILSV RYNNIRSLPT TMASLTKLKE VDASFNELES IPENFCFVTS LVKLNVGNNF ADMQSLPRSI GNLEMLEELD ISNNQIRVLP DSFGMLQHLR
501: VLRAEENPLQ VPPREIALKG AQAAVQYMAE HAAKKTTKPQ PAKAKNWAQF CIFSRPNKRK HDRIDTDMID
101: LHALFDDLIQ RASQCVPSTS TGAAPRTTST AAAGAASSSS ASSAGPLPAA GRSSLVTNGF SAERTVGTSM GRVSMDDSYV KKAKAPMWDG GLVAASPRKP
201: GGTAAANSAA VRLDDSYGDD KLKMSLIKLA SMIEVAAKTG ARELNFKGKL MAQIEWIPDS IGKLNGLVTL DISENRLVAL PPTIGKLSSL TKLDLHANRI
301: AQLPDSVGDL RSLLCLDLRG NQLTSLPSRI GRLANLEELD VGANHIVSLP DSVGSLTRLK KLLVETNDLD ELPYTIGHCV SLVELQAGYN HLKALPEAVG
401: KLESLEILSV RYNNIRSLPT TMASLTKLKE VDASFNELES IPENFCFVTS LVKLNVGNNF ADMQSLPRSI GNLEMLEELD ISNNQIRVLP DSFGMLQHLR
501: VLRAEENPLQ VPPREIALKG AQAAVQYMAE HAAKKTTKPQ PAKAKNWAQF CIFSRPNKRK HDRIDTDMID
001: MDLMQMDKRL DSTEQVVEEI MRIHRSLPAR PGIDEVEAAK GLIDNVEKED QACLEAIARQ RKSSEVPGEL FMVLQEMKKG YVQFRSKEQI REALKLLDLE
101: SVHSLFDDFI QRASNCIASP SSNGSVSSRP PLPPATTTAA RSDSQSSLNF SERAPVRPKD MVSRDDSFVT KSKPSSLYSD GFAAPPRRPQ ILDSTLTTGN
201: DGEKLSLIKL ASLIEVSAKK ATQEINLQNK LTEQLEWLPD SLGKLSSLTS LDLSENHIVV LPNTIGGLSS LTKLDLHSNR IGQLPESIGE LLNLVYLNLG
301: SNQLSSLPSA FSRLVRLEEL DLSCNNLPIL PESIGSLVSL KKLDVETNDI EEIPYSIGGC SSLIELRADY NKLKALPEAI GKITTLEILS VRYNNIRQLP
401: TTMSSLASLK ELDVSFNELE SVPESLCFAT TLVKLNIGNN FADMVSLPRS IGNLEMLEEL DISNNQIRVL PDSFKMLTKL RVFRAQENPL HIPPRDIAEK
501: GPQAVVQYMN DLVETRNAKS LMVKPKKSWV QMCFFSKSNK RKQSSMEIV
101: SVHSLFDDFI QRASNCIASP SSNGSVSSRP PLPPATTTAA RSDSQSSLNF SERAPVRPKD MVSRDDSFVT KSKPSSLYSD GFAAPPRRPQ ILDSTLTTGN
201: DGEKLSLIKL ASLIEVSAKK ATQEINLQNK LTEQLEWLPD SLGKLSSLTS LDLSENHIVV LPNTIGGLSS LTKLDLHSNR IGQLPESIGE LLNLVYLNLG
301: SNQLSSLPSA FSRLVRLEEL DLSCNNLPIL PESIGSLVSL KKLDVETNDI EEIPYSIGGC SSLIELRADY NKLKALPEAI GKITTLEILS VRYNNIRQLP
401: TTMSSLASLK ELDVSFNELE SVPESLCFAT TLVKLNIGNN FADMVSLPRS IGNLEMLEEL DISNNQIRVL PDSFKMLTKL RVFRAQENPL HIPPRDIAEK
501: GPQAVVQYMN DLVETRNAKS LMVKPKKSWV QMCFFSKSNK RKQSSMEIV
Arabidopsis Description
PIRL4Plant intracellular Ras-group-related LRR protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVW8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.