CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30364	Canola	cytosol	90.82	94.91
Bra037271.1-P	Field mustard	cytosol	91.2	94.56
CDY66405	Canola	cytosol	82.77	88.4
CDY07843	Canola	nucleus	82.21	87.8
AT2G17440.1	Thale cress	cytosol	79.78	80.99
CDX72539	Canola	nucleus	51.12	69.47
CDX69142	Canola	cytosol	67.42	66.18
CDX75505	Canola	cytosol	66.67	65.93
CDY40632	Canola	nucleus	66.29	64.95
KRH28950	Soybean	cytosol	63.86	60.14
KRH39397	Soybean	nucleus	61.61	59.71
KRH76512	Soybean	nucleus	63.86	59.41
KRH07815	Soybean	cytosol	60.49	58.94
VIT_07s0031g02310.t01	Wine grape	cytosol	61.42	58.89
PGSC0003DMT400059678	Potato	nucleus	60.67	56.94
PGSC0003DMT400035497	Potato	cytosol	60.86	56.82
GSMUA_Achr5P23850_001	Banana	cytosol	58.43	56.62
GSMUA_Achr8P25490_001	Banana	nucleus	58.24	56.24
Solyc02g082350.2.1	Tomato	nucleus	60.49	55.98
Os08t0511700-00	Rice	plasma membrane	52.81	49.13
EES14257	Sorghum	nucleus	52.25	48.27
TraesCS7B01G143600.3	Wheat	nucleus	50.94	47.97
TraesCS7A01G247900.2	Wheat	cytosol	50.75	47.54
TraesCS7D01G246700.1	Wheat	nucleus	50.37	47.19
Zm00001d031470_P001	Maize	plasma membrane	50.56	46.79
CDY30187	Canola	nucleus	16.29	31.18
CDX73881	Canola	cytosol	23.6	29.3
CDY00732	Canola	cytosol	23.41	29.07
CDY14024	Canola	mitochondrion	13.86	28.14
CDY40770	Canola	cytosol	13.86	28.03
CDX78316	Canola	cytosol, mitochondrion, nucleus	13.67	27.86
CDX81078	Canola	mitochondrion	13.67	27.86
CDY69629	Canola	cytosol	17.6	27.65
CDY26604	Canola	cytosol	23.41	27.0
CDY16042	Canola	cytosol	23.41	27.0
CDX70122	Canola	cytosol	24.34	26.92
CDX98871	Canola	cytosol	24.34	26.92
CDY48988	Canola	cytosol	23.6	26.64
CDY01012	Canola	plastid	23.41	26.15
CDY08535	Canola	plastid	23.97	25.75
CDY46713	Canola	nucleus	17.6	25.68
CDX89369	Canola	cytosol, plastid	19.1	25.63
CDX94383	Canola	cytosol	18.91	25.38
CDY42760	Canola	cytosol, plastid	18.54	25.06
CDX82667	Canola	nucleus, plastid	17.98	25.0
CDY39144	Canola	nucleus, plastid	17.98	25.0
CDX92748	Canola	cytosol, plasma membrane, plastid	16.67	23.8
GSMUA_Achr6P03430_001	Banana	nucleus	20.04	22.67
CDX97851	Canola	cytosol	12.73	18.73
CDY29703	Canola	cytosol	12.73	18.73
CDY56828	Canola	nucleus	17.6	16.07
CDX97667	Canola	nucleus	17.6	16.07

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A078GNI5	EnsemblPlants:CDY26809	ProteinID:CDY26809	ProteinID:CDY26809.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00035754001	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450
PANTHER:PTHR44513	PANTHER:PTHR44513:SF1	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0004EDC949
SEG:seg	:	:	:	:	:

Description

BnaC09g09360DBnaC09g09360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNI5]

Coordinates

chrLK032194:+:365277..367461

Molecular Weight (calculated)

59401.4 Da

IEP (calculated)

5.291

GRAVY (calculated)

-0.261

Length

534 amino acids

Sequence
(BLAST)

001: MVMMDKHLDS MNQVVEEIMS IHRSLPSRPD IDDVEAATSL IQNVENDDQS RLDAVDRQIK SSGVPQELFD ALQEMRRGLV RFQSKEQKRE AAKVLDLESA
101: HVVFDELIQR ASRCVASPPS SDTNPSRPPL APVVSPASLY SSDQTPVKSK EMFTRDDTFV TKVKSSLYSD GFLAPRKPQV LDSTLQAKNL SGHDGEKLSL
201: IKLATLIEVS AKKATQELNL QHKLIDNLEW LPDSLGKLSS LVRLDLSENC IMALPPTIGG LLSLTWLDLH SNRIGQLPES IGDLMNLVNL NLSGNQLTSL
301: PSSLSRLISL EELDLSSNSL SVLPETIGSL GSLEKLDVET NNIEEIPHSI SGCSSLKELR ADYNRLKALP EAVGKIATLE ILTVRYNNIR QLPTTMSSMA
401: NLKELDVSFN ELESVPESLC YATTLVKLNI GNNFANLRSL PGLIGNLEKL EELDMSNNQI RYLPYSFKAL SQLCVLRTQQ NPLEELPRDI IQKGAQAVVQ
501: YMHDLVEARN TKCQRTKQNK SWVVRICFLC KSTN

Best Arabidopsis Sequence Match ( AT2G17440.1 )
(BLAST)

001: MDSKEMVVEE IMRIHRSLPL RPEIDDVETA TSLIQNVEKE DRNRLEAIDK LVKTSSSEVP LELFNVFKEM KKSLVRFQST EQTREATKIL DLESVHVVFD
101: ELIQRASFCI ASPNSTTALP RSVPVPAPVV SSDEIPFKSK EIISRDDTFV KKAKSSFYSD GLLAPSKPQV LDSTLHQAKN VAGNDGEKLS LIKLASLIEV
201: SAKKATQELN LQHRLMDQLE WLPDSLGKLS SLVRLDLSEN CIMVLPATIG GLISLTRLDL HSNRIGQLPE SIGDLLNLVN LNLSGNQLSS LPSSFNRLIH
301: LEELDLSSNS LSILPESIGS LVSLKKLDVE TNNIEEIPHS ISGCSSMEEL RADYNRLKAL PEAVGKLSTL EILTVRYNNI RQLPTTMSSM ANLKELDVSF
401: NELESVPESL CYAKTLVKLN IGNNFANLRS LPGLIGNLEK LEELDMSNNQ IRFLPYSFKT LSNLRVLQTE QNPLEELPRD ITEKGAQAVV QYMNDLVEAR
501: NTKSQRTKPK KSWVNSICFF CKSSTN

Arabidopsis Description

PIRL5Plant intracellular Ras-group-related LRR protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5G5E0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.