Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40770 | Canola | cytosol | 98.86 | 98.48 |
| CDX78316 | Canola | cytosol, mitochondrion, nucleus | 93.54 | 93.89 |
| CDX81078 | Canola | mitochondrion | 93.16 | 93.51 |
| AT5G07910.1 | Thale cress | cytosol | 90.49 | 90.84 |
| KRH54661 | Soybean | cytosol | 76.43 | 77.01 |
| KRH63260 | Soybean | cytosol | 74.9 | 75.48 |
| VIT_17s0000g06940.t01 | Wine grape | cytosol | 74.14 | 74.71 |
| Solyc03g115410.2.1 | Tomato | cytosol | 69.96 | 71.04 |
| Solyc12g040320.1.1 | Tomato | mitochondrion | 68.82 | 69.35 |
| PGSC0003DMT400063105 | Potato | cytosol | 67.68 | 67.94 |
| GSMUA_Achr4P03290_001 | Banana | cytosol | 33.84 | 64.96 |
| PGSC0003DMT400013776 | Potato | cytosol | 55.89 | 64.76 |
| GSMUA_Achr4P03280_001 | Banana | plastid | 32.7 | 60.14 |
| EER95291 | Sorghum | cytosol | 59.7 | 59.92 |
| HORVU4Hr1G068710.2 | Barley | cytosol, mitochondrion, nucleus, plastid | 59.32 | 59.54 |
| TraesCS4B01G249200.1 | Wheat | cytosol, nucleus, plastid | 59.32 | 59.54 |
| TraesCS4D01G249500.1 | Wheat | cytosol, mitochondrion | 58.94 | 59.16 |
| Os03t0212200-01 | Rice | plasma membrane | 30.8 | 57.04 |
| Zm00001d028191_P002 | Maize | cytosol | 59.7 | 47.29 |
| TraesCS4A01G055400.1 | Wheat | nucleus | 59.7 | 46.31 |
| CDY30187 | Canola | nucleus | 19.01 | 17.92 |
| CDY00732 | Canola | cytosol | 27.0 | 16.51 |
| CDY69629 | Canola | cytosol | 21.29 | 16.47 |
| CDX73881 | Canola | cytosol | 26.62 | 16.28 |
| CDX72539 | Canola | nucleus | 23.95 | 16.03 |
| CDX89369 | Canola | cytosol, plastid | 23.57 | 15.58 |
| CDX98871 | Canola | cytosol | 28.52 | 15.53 |
| CDX70122 | Canola | cytosol | 28.52 | 15.53 |
| CDY42760 | Canola | cytosol, plastid | 23.19 | 15.44 |
| CDY16042 | Canola | cytosol | 27.0 | 15.33 |
| CDY26604 | Canola | cytosol | 27.0 | 15.33 |
| CDY39144 | Canola | nucleus, plastid | 22.05 | 15.1 |
| CDX82667 | Canola | nucleus, plastid | 22.05 | 15.1 |
| CDX94383 | Canola | cytosol | 22.81 | 15.08 |
| CDY46713 | Canola | nucleus | 20.91 | 15.03 |
| CDY48988 | Canola | cytosol | 26.62 | 14.8 |
| CDY30364 | Canola | cytosol | 28.14 | 14.48 |
| CDX92748 | Canola | cytosol, plasma membrane, plastid | 20.53 | 14.44 |
| CDY08535 | Canola | plastid | 27.0 | 14.29 |
| CDY01012 | Canola | plastid | 25.86 | 14.23 |
| CDY66405 | Canola | cytosol | 27.0 | 14.2 |
| CDY07843 | Canola | nucleus | 27.0 | 14.2 |
| CDY26809 | Canola | nucleus | 28.14 | 13.86 |
| CDX75505 | Canola | cytosol | 27.38 | 13.33 |
| CDX69142 | Canola | cytosol | 27.0 | 13.05 |
| CDX97667 | Canola | nucleus | 28.9 | 12.99 |
| CDY56828 | Canola | nucleus | 28.52 | 12.82 |
| CDY40632 | Canola | nucleus | 26.24 | 12.66 |
| CDX97851 | Canola | cytosol | 17.11 | 12.4 |
| CDY29703 | Canola | cytosol | 17.11 | 12.4 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A078FMD9 | EnsemblPlants:CDY14024 | ProteinID:CDY14024 | ProteinID:CDY14024.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00078549001 | InterPro:IPR001611 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF13855 | PFscan:PS51450 | PANTHER:PTHR45289 |
| PANTHER:PTHR45289:SF1 | SMART:SM00364 | SMART:SM00369 | SUPFAM:SSF52058 | UniParc:UPI0004EE4980 | SEG:seg |
Description
BnaC02g01410DBnaC02g01410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FMD9]
Coordinates
chrLK032040:+:33769..36126
Molecular Weight (calculated)
29218.6 Da
IEP (calculated)
7.183
GRAVY (calculated)
-0.224
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCCASNTAG GGSKASRVAR WRSTGIIGLR DSKLKTFPDE VIIMERAVRT LDLTHNKISD VPAEVSKLIN MQRLLIADNL IERLPGNLGK LQSLKVLMLD
101: GNRTSCLPDE LGQLIRLEQL SISRNMLIYL PDTIGSLRNL VLLNVSNNRL KSLPESVGSC ASLEEIQAND NVIEELPASL CNLIQLKSLC LDNNQVKQIP
201: DGLLKDCKSL QNLSLHNNPI SMDEFQLMEG YQEFEERRKK KFDKQIDSNV MISSKGLDVG VDK
101: GNRTSCLPDE LGQLIRLEQL SISRNMLIYL PDTIGSLRNL VLLNVSNNRL KSLPESVGSC ASLEEIQAND NVIEELPASL CNLIQLKSLC LDNNQVKQIP
201: DGLLKDCKSL QNLSLHNNPI SMDEFQLMEG YQEFEERRKK KFDKQIDSNV MISSKGLDVG VDK
001: MGCCASNTAG GSKANRISRW RSTGIVGLRD SKLKTFPDEV IEMERAVRTL DLTHNKIADV PGEISKLINM QRLLIADNLV ERLPGNLGKL QSLKVLMLDG
101: NRISCLPDEL GQLVRLEQLS ISRNMLIYLP DTIGSLRNLL LLNVSNNRLK SLPESVGSCA SLEEVQANDN VVEELPASLC NLIQLKSLSL DNNQVNQIPD
201: GLLIHCKSLQ NLSLHNNPIS MDQFQLMEGY QDFEERRKKK FDKQIDSNVM MGSKALDVGV DK
101: NRISCLPDEL GQLVRLEQLS ISRNMLIYLP DTIGSLRNLL LLNVSNNRLK SLPESVGSCA SLEEVQANDN VVEELPASLC NLIQLKSLSL DNNQVNQIPD
201: GLLIHCKSLQ NLSLHNNPIS MDQFQLMEGY QDFEERRKKK FDKQIDSNVM MGSKALDVGV DK
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q8RWI2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.