Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- extracellular 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028680.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY14024 | Canola | mitochondrion | 98.48 | 98.86 |
| CDX78316 | Canola | cytosol, mitochondrion, nucleus | 93.18 | 93.89 |
| CDX81078 | Canola | mitochondrion | 92.8 | 93.51 |
| AT5G07910.1 | Thale cress | cytosol | 90.53 | 91.22 |
| KRH54661 | Soybean | cytosol | 76.52 | 77.39 |
| KRH63260 | Soybean | cytosol | 75.0 | 75.86 |
| VIT_17s0000g06940.t01 | Wine grape | cytosol | 73.86 | 74.71 |
| Solyc03g115410.2.1 | Tomato | cytosol | 70.08 | 71.43 |
| Solyc12g040320.1.1 | Tomato | mitochondrion | 69.32 | 70.11 |
| PGSC0003DMT400063105 | Potato | cytosol | 67.8 | 68.32 |
| PGSC0003DMT400013776 | Potato | cytosol | 56.06 | 65.2 |
| GSMUA_Achr4P03290_001 | Banana | cytosol | 33.71 | 64.96 |
| GSMUA_Achr4P03280_001 | Banana | plastid | 32.95 | 60.84 |
| EER95291 | Sorghum | cytosol | 59.47 | 59.92 |
| TraesCS4B01G249200.1 | Wheat | cytosol, nucleus, plastid | 59.09 | 59.54 |
| HORVU4Hr1G068710.2 | Barley | cytosol, mitochondrion, nucleus, plastid | 59.09 | 59.54 |
| TraesCS4D01G249500.1 | Wheat | cytosol, mitochondrion | 58.71 | 59.16 |
| Os03t0212200-01 | Rice | plasma membrane | 30.68 | 57.04 |
| Zm00001d028191_P002 | Maize | cytosol | 59.47 | 47.29 |
| TraesCS4A01G055400.1 | Wheat | nucleus | 59.47 | 46.31 |
| CDY30187 | Canola | nucleus | 19.32 | 18.28 |
| CDY00732 | Canola | cytosol | 26.52 | 16.28 |
| CDY69629 | Canola | cytosol | 20.83 | 16.18 |
| CDX73881 | Canola | cytosol | 26.14 | 16.05 |
| CDX72539 | Canola | nucleus | 23.86 | 16.03 |
| CDX89369 | Canola | cytosol, plastid | 23.86 | 15.83 |
| CDY42760 | Canola | cytosol, plastid | 23.48 | 15.7 |
| CDX94383 | Canola | cytosol | 23.11 | 15.33 |
| CDX98871 | Canola | cytosol | 28.03 | 15.32 |
| CDX70122 | Canola | cytosol | 28.03 | 15.32 |
| CDY46713 | Canola | nucleus | 21.21 | 15.3 |
| CDY26604 | Canola | cytosol | 26.52 | 15.12 |
| CDY16042 | Canola | cytosol | 26.52 | 15.12 |
| CDX82667 | Canola | nucleus, plastid | 21.97 | 15.1 |
| CDY39144 | Canola | nucleus, plastid | 21.97 | 15.1 |
| CDY48988 | Canola | cytosol | 26.14 | 14.59 |
| CDY30364 | Canola | cytosol | 28.03 | 14.48 |
| CDX92748 | Canola | cytosol, plasma membrane, plastid | 20.45 | 14.44 |
| CDY01012 | Canola | plastid | 25.76 | 14.23 |
| CDY07843 | Canola | nucleus | 26.89 | 14.2 |
| CDY66405 | Canola | cytosol | 26.89 | 14.2 |
| CDY08535 | Canola | plastid | 26.52 | 14.08 |
| CDY26809 | Canola | nucleus | 28.03 | 13.86 |
| CDX75505 | Canola | cytosol | 27.27 | 13.33 |
| CDX69142 | Canola | cytosol | 26.89 | 13.05 |
| CDX97667 | Canola | nucleus | 28.79 | 12.99 |
| CDY56828 | Canola | nucleus | 28.41 | 12.82 |
| CDX97851 | Canola | cytosol | 17.42 | 12.67 |
| CDY29703 | Canola | cytosol | 17.42 | 12.67 |
| CDY40632 | Canola | nucleus | 26.14 | 12.66 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A078HQ96 | EnsemblPlants:CDY40770 | ProteinID:CDY40770 | ProteinID:CDY40770.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00071671001 | InterPro:IPR001611 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF13855 | PFscan:PS51450 | PANTHER:PTHR45289 |
| PANTHER:PTHR45289:SF1 | SMART:SM00364 | SMART:SM00369 | SUPFAM:SSF52058 | UniParc:UPI000254325C | SEG:seg |
Description
BnaAnng06330DBnaAnng06330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQ96]
Coordinates
chrLK032478:+:181411..183633
Molecular Weight (calculated)
29305.8 Da
IEP (calculated)
7.183
GRAVY (calculated)
-0.214
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCCASNTAG GGGSKASRMA RWRSTGIIGL RDSKLKTFPD EVIVMERAVR TLDLTHNKIS DVPAEVSKLI NMQRLLIADN LIERLPGNLG KLQSLKVLML
101: DGNRISCLPD ELGQLIRLEQ LSISRNMLIY LPDTIGSLRN LVLLNVSNNR LKSLPESVGS CASLEEIQAN DNVIEELPAS LCNLIQLKSL CLDNNQVKQI
201: PDGLLKDCKS LQNLSLHNNP ISMDEFQLME GYQEFEERRK KKFDKQIDSN VMISSKGLDV GVDK
101: DGNRISCLPD ELGQLIRLEQ LSISRNMLIY LPDTIGSLRN LVLLNVSNNR LKSLPESVGS CASLEEIQAN DNVIEELPAS LCNLIQLKSL CLDNNQVKQI
201: PDGLLKDCKS LQNLSLHNNP ISMDEFQLME GYQEFEERRK KKFDKQIDSN VMISSKGLDV GVDK
001: MGCCASNTAG GSKANRISRW RSTGIVGLRD SKLKTFPDEV IEMERAVRTL DLTHNKIADV PGEISKLINM QRLLIADNLV ERLPGNLGKL QSLKVLMLDG
101: NRISCLPDEL GQLVRLEQLS ISRNMLIYLP DTIGSLRNLL LLNVSNNRLK SLPESVGSCA SLEEVQANDN VVEELPASLC NLIQLKSLSL DNNQVNQIPD
201: GLLIHCKSLQ NLSLHNNPIS MDQFQLMEGY QDFEERRKKK FDKQIDSNVM MGSKALDVGV DK
101: NRISCLPDEL GQLVRLEQLS ISRNMLIYLP DTIGSLRNLL LLNVSNNRLK SLPESVGSCA SLEEVQANDN VVEELPASLC NLIQLKSLSL DNNQVNQIPD
201: GLLIHCKSLQ NLSLHNNPIS MDQFQLMEGY QDFEERRKKK FDKQIDSNVM MGSKALDVGV DK
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q8RWI2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.