Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- cytosol 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038857.1-P | Field mustard | nucleus, plastid | 100.0 | 100.0 |
| CDY39144 | Canola | nucleus, plastid | 100.0 | 100.0 |
| AT2G19330.1 | Thale cress | nucleus, plastid | 91.93 | 92.89 |
| CDY30187 | Canola | nucleus | 58.59 | 80.65 |
| CDY46713 | Canola | nucleus | 75.52 | 79.23 |
| VIT_11s0052g00390.t01 | Wine grape | cytosol | 57.03 | 71.1 |
| KRH02753 | Soybean | cytosol | 61.98 | 66.11 |
| GSMUA_AchrUn_... | Banana | nucleus | 54.95 | 62.06 |
| KRH37361 | Soybean | cytosol | 57.29 | 61.97 |
| GSMUA_Achr1P23570_001 | Banana | nucleus | 54.95 | 61.52 |
| PGSC0003DMT400016538 | Potato | mitochondrion | 57.55 | 60.88 |
| KRH12356 | Soybean | cytosol | 56.77 | 60.06 |
| Solyc12g017480.1.1 | Tomato | cytosol | 56.25 | 59.34 |
| Zm00001d002399_P001 | Maize | nucleus | 36.46 | 55.78 |
| Os04t0605300-01 | Rice | nucleus | 51.04 | 55.68 |
| CDY42760 | Canola | cytosol, plastid | 57.03 | 55.44 |
| CDX89369 | Canola | cytosol, plastid | 56.25 | 54.27 |
| CDX92748 | Canola | cytosol, plasma membrane, plastid | 52.6 | 54.01 |
| CDX94383 | Canola | cytosol | 55.73 | 53.77 |
| KXG27059 | Sorghum | cytosol, nucleus, plastid | 50.78 | 53.72 |
| Zm00001d002402_P001 | Maize | cytosol, nucleus, plastid | 50.78 | 53.72 |
| TraesCS2A01G432800.1 | Wheat | cytosol, nucleus, plastid | 48.44 | 50.96 |
| TraesCS2D01G430800.1 | Wheat | cytosol, nucleus, plastid | 47.92 | 50.83 |
| TraesCS2B01G454100.1 | Wheat | cytosol, nucleus, plastid | 47.66 | 50.55 |
| HORVU2Hr1G101090.6 | Barley | plastid | 48.7 | 44.31 |
| CDX73881 | Canola | cytosol | 32.81 | 29.3 |
| CDY00732 | Canola | cytosol | 32.55 | 29.07 |
| CDY01012 | Canola | plastid | 33.59 | 26.99 |
| CDX72539 | Canola | nucleus | 27.34 | 26.72 |
| CDY26604 | Canola | cytosol | 32.03 | 26.57 |
| CDY16042 | Canola | cytosol | 31.77 | 26.35 |
| CDY08535 | Canola | plastid | 33.85 | 26.16 |
| CDY69629 | Canola | cytosol | 22.4 | 25.29 |
| CDX70122 | Canola | cytosol | 31.77 | 25.26 |
| CDX98871 | Canola | cytosol | 31.77 | 25.26 |
| CDY48988 | Canola | cytosol | 30.99 | 25.16 |
| CDX81078 | Canola | mitochondrion | 15.36 | 22.52 |
| CDY14024 | Canola | mitochondrion | 15.1 | 22.05 |
| CDY40770 | Canola | cytosol | 15.1 | 21.97 |
| CDX78316 | Canola | cytosol, mitochondrion, nucleus | 14.84 | 21.76 |
| CDY66405 | Canola | cytosol | 26.56 | 20.4 |
| CDX75505 | Canola | cytosol | 28.65 | 20.37 |
| CDX69142 | Canola | cytosol | 28.39 | 20.04 |
| CDY07843 | Canola | nucleus | 26.04 | 20.0 |
| CDY40632 | Canola | nucleus | 27.6 | 19.45 |
| CDY30364 | Canola | cytosol | 25.26 | 18.98 |
| CDY26809 | Canola | nucleus | 25.0 | 17.98 |
| CDY29703 | Canola | cytosol | 15.62 | 16.53 |
| CDX97851 | Canola | cytosol | 15.36 | 16.25 |
| CDX97667 | Canola | nucleus | 22.66 | 14.87 |
| CDY56828 | Canola | nucleus | 22.14 | 14.53 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A078HP21 | EnsemblPlants:CDX82667 | ProteinID:CDX82667 | ProteinID:CDX82667.1 |
| ProteinID:CDY39144.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00137914001 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF13855 | PFscan:PS51450 |
| PANTHER:PTHR44997 | SMART:SM00364 | SMART:SM00369 | SUPFAM:SSF52058 | UniParc:UPI000254101B | SEG:seg |
Description
BnaC07g01990DBnaA07g01400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HP21]
Coordinates
chrLK031829:+:1061126..1063111
Molecular Weight (calculated)
43141.3 Da
IEP (calculated)
9.461
GRAVY (calculated)
-0.302
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MICEETYHQQ PQAPIKEHMM TMMMMDQHQS RKSPLSSSPS SPSSSPRSPS SPRSPSFNIN NEEERLEVVN MSGMALESLP NPSINLAQIC KLDLSNNYLQ
101: TIPESLTARL LNLIALDVHS NQLKALPNSI GCLSKLKTLN VSGNFLVSLP KSIQHCRSLE ELNANFNKLI RLPDSIGYEL TNLRKLSVNS NKLISLPISI
201: THLTSLRALD ARLNCLMILP DDLENLINLE ILNVSQNFQY LTALPSSIGL LMNLIELDVS YNKITVLPES IGCMRRLRKL SVEGNPLVSP PAEVMEQNLQ
301: VVREYLTQKI NGTAPKSPSK KKSWGFGKLV KYGTFNGGSR SWNREEREGF IMPEYRSIDS LASPRYSGMF SPRRLFSPRS YFSR
101: TIPESLTARL LNLIALDVHS NQLKALPNSI GCLSKLKTLN VSGNFLVSLP KSIQHCRSLE ELNANFNKLI RLPDSIGYEL TNLRKLSVNS NKLISLPISI
201: THLTSLRALD ARLNCLMILP DDLENLINLE ILNVSQNFQY LTALPSSIGL LMNLIELDVS YNKITVLPES IGCMRRLRKL SVEGNPLVSP PAEVMEQNLQ
301: VVREYLTQKI NGTAPKSPSK KKSWGFGKLV KYGTFNGGSR SWNREEREGF IMPEYRSIDS LASPRYSGMF SPRRLFSPRS YFSR
001: MICEEAYHQQ PQIQKEQMMT MDQRNNHQRK RSPLSSPSSP SSPSSPSSPK SPSFNNNEEE RLEVVNLSGM ALESLPNPSL NLAQICKLDL SNNHLQTIPE
101: SLTARLLNLI ALDVHSNQIK ALPNSIGCLS KLKTLNVSGN FLVSFPKSIQ HCRSLEELNA NFNKLIRLPD SIGFELTNLR KLSINSNKLI SLPISITHLT
201: SLRVLDARLN CLMILPDDLE NLINLEILNV SQNFQYLSAL PSSIGLLMNL IELDVSYNKI TVLPESIGCM RRLRKLSVEG NPLVSPPIEV MEQNLQVVRE
301: YLTQKMNGGS PRSPSKKKSW GFGKLVKYGT FNGGSRSWNR EEREGFIMPE YRSIDSLASP RYSGMFSPRR LFSPRTYFSR
101: SLTARLLNLI ALDVHSNQIK ALPNSIGCLS KLKTLNVSGN FLVSFPKSIQ HCRSLEELNA NFNKLIRLPD SIGFELTNLR KLSINSNKLI SLPISITHLT
201: SLRVLDARLN CLMILPDDLE NLINLEILNV SQNFQYLSAL PSSIGLLMNL IELDVSYNKI TVLPESIGCM RRLRKLSVEG NPLVSPPIEV MEQNLQVVRE
301: YLTQKMNGGS PRSPSKKKSW GFGKLVKYGT FNGGSRSWNR EEREGFIMPE YRSIDSLASP RYSGMFSPRR LFSPRTYFSR
Arabidopsis Description
PIRL6Plant intracellular Ras-group-related LRR protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O64566]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.