Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P23570_001 | Banana | nucleus | 86.18 | 85.42 |
| VIT_11s0052g00390.t01 | Wine grape | cytosol | 63.53 | 70.13 |
| Zm00001d002399_P001 | Maize | nucleus | 46.76 | 63.35 |
| Os04t0605300-01 | Rice | nucleus | 64.41 | 62.22 |
| Zm00001d002402_P001 | Maize | cytosol, nucleus, plastid | 64.41 | 60.33 |
| KXG27059 | Sorghum | cytosol, nucleus, plastid | 64.12 | 60.06 |
| KRH02753 | Soybean | cytosol | 63.24 | 59.72 |
| KRH37361 | Soybean | cytosol | 61.18 | 58.59 |
| TraesCS2D01G430800.1 | Wheat | cytosol, nucleus, plastid | 60.88 | 57.18 |
| TraesCS2A01G432800.1 | Wheat | cytosol, nucleus, plastid | 61.18 | 56.99 |
| TraesCS2B01G454100.1 | Wheat | cytosol, nucleus, plastid | 60.59 | 56.91 |
| PGSC0003DMT400016538 | Potato | mitochondrion | 60.59 | 56.75 |
| KRH12356 | Soybean | cytosol | 60.29 | 56.47 |
| Solyc12g017480.1.1 | Tomato | cytosol | 60.29 | 56.32 |
| CDY30187 | Canola | nucleus | 45.88 | 55.91 |
| Bra024119.1-P | Field mustard | cytosol | 60.0 | 55.74 |
| AT2G19330.1 | Thale cress | nucleus, plastid | 62.06 | 55.53 |
| CDY39144 | Canola | nucleus, plastid | 62.06 | 54.95 |
| CDX82667 | Canola | nucleus, plastid | 62.06 | 54.95 |
| Bra038857.1-P | Field mustard | nucleus, plastid | 62.06 | 54.95 |
| CDY46713 | Canola | nucleus | 59.12 | 54.92 |
| AT4G29880.1 | Thale cress | nucleus | 58.24 | 53.08 |
| AT4G26050.1 | Thale cress | cytosol | 58.53 | 51.96 |
| Bra019126.1-P | Field mustard | cytosol, plastid | 59.41 | 51.14 |
| CDY42760 | Canola | cytosol, plastid | 59.41 | 51.14 |
| Bra013944.1-P | Field mustard | cytosol, plastid | 59.41 | 50.75 |
| CDX89369 | Canola | cytosol, plastid | 59.41 | 50.75 |
| CDX94383 | Canola | cytosol | 58.82 | 50.25 |
| HORVU2Hr1G101090.6 | Barley | plastid | 61.76 | 49.76 |
| CDX92748 | Canola | cytosol, plasma membrane, plastid | 53.82 | 48.93 |
| GSMUA_Achr4P03290_001 | Banana | cytosol | 10.29 | 25.55 |
| GSMUA_Achr1P13500_001 | Banana | plastid | 36.18 | 25.15 |
| GSMUA_Achr8P28520_001 | Banana | cytosol, nucleus, plastid | 35.0 | 23.75 |
| GSMUA_Achr4P21530_001 | Banana | cytosol | 31.47 | 20.15 |
| GSMUA_Achr8P25490_001 | Banana | nucleus | 32.65 | 20.07 |
| GSMUA_Achr5P23850_001 | Banana | cytosol | 31.76 | 19.6 |
| GSMUA_Achr4P19230_001 | Banana | cytosol | 29.71 | 19.39 |
| GSMUA_Achr6P03430_001 | Banana | nucleus | 24.71 | 17.8 |
| GSMUA_Achr4P03280_001 | Banana | plastid | 6.76 | 16.08 |
| GSMUA_Achr5P07410_001 | Banana | cytosol | 17.94 | 16.05 |
| GSMUA_Achr4P04360_001 | Banana | cytosol | 26.18 | 15.21 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP04530_001 | EnsemblPlants:GSMUA_AchrUn_randomT04530_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG04530_001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp |
| PANTHER:PTHR44997 | PFAM:PF13855 | PFscan:PS51450 | PRINTS:PR00019 | SMART:SM00364 | SMART:SM00369 |
| SUPFAM:SSF52058 | UniParc:UPI000295CC25 | UniProt:M0U6B5 | MapMan:35.1 | : | : |
Description
Putative Protein lap1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04530_001]
Coordinates
chrchrUn_random:+:18261684..18263376
Molecular Weight (calculated)
37536.5 Da
IEP (calculated)
8.100
GRAVY (calculated)
-0.156
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAKTSERAE SESDGVKKEQ ELDLSGMSLD SLPNPSINLG IITKLDLSNN NLQSIPESLT ARLLNLVVLD VHSNQLRALP NSIGCLSKLK ALNVSGNLME
101: SLPKTIEDCR ALQELIANFN QLTKLPDTMG FELTNLQMLA VNTNKLAFLP YSTSHMTSLR VLDARLNCLR ALPDGLENLI RLQVLNVGQN FQYLQSLPYA
201: IGLLVSLVEL DISYNSITVL PNSMGCLTKL RKFQVEGNPL VCPPTDVVEQ GIDVTREYLS ARMNGSETGP SSSKQSWIKN LVKCGTFSGR MMSSNISVRD
301: EKDGLLMSDY RSIDGLASPR YVGIFSPRRL FSPRRASPRK
101: SLPKTIEDCR ALQELIANFN QLTKLPDTMG FELTNLQMLA VNTNKLAFLP YSTSHMTSLR VLDARLNCLR ALPDGLENLI RLQVLNVGQN FQYLQSLPYA
201: IGLLVSLVEL DISYNSITVL PNSMGCLTKL RKFQVEGNPL VCPPTDVVEQ GIDVTREYLS ARMNGSETGP SSSKQSWIKN LVKCGTFSGR MMSSNISVRD
301: EKDGLLMSDY RSIDGLASPR YVGIFSPRRL FSPRRASPRK
001: MICEEAYHQQ PQIQKEQMMT MDQRNNHQRK RSPLSSPSSP SSPSSPSSPK SPSFNNNEEE RLEVVNLSGM ALESLPNPSL NLAQICKLDL SNNHLQTIPE
101: SLTARLLNLI ALDVHSNQIK ALPNSIGCLS KLKTLNVSGN FLVSFPKSIQ HCRSLEELNA NFNKLIRLPD SIGFELTNLR KLSINSNKLI SLPISITHLT
201: SLRVLDARLN CLMILPDDLE NLINLEILNV SQNFQYLSAL PSSIGLLMNL IELDVSYNKI TVLPESIGCM RRLRKLSVEG NPLVSPPIEV MEQNLQVVRE
301: YLTQKMNGGS PRSPSKKKSW GFGKLVKYGT FNGGSRSWNR EEREGFIMPE YRSIDSLASP RYSGMFSPRR LFSPRTYFSR
101: SLTARLLNLI ALDVHSNQIK ALPNSIGCLS KLKTLNVSGN FLVSFPKSIQ HCRSLEELNA NFNKLIRLPD SIGFELTNLR KLSINSNKLI SLPISITHLT
201: SLRVLDARLN CLMILPDDLE NLINLEILNV SQNFQYLSAL PSSIGLLMNL IELDVSYNKI TVLPESIGCM RRLRKLSVEG NPLVSPPIEV MEQNLQVVRE
301: YLTQKMNGGS PRSPSKKKSW GFGKLVKYGT FNGGSRSWNR EEREGFIMPE YRSIDSLASP RYSGMFSPRR LFSPRTYFSR
Arabidopsis Description
PIRL6Plant intracellular Ras-group-related LRR protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O64566]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.