Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G430800.1 | Wheat | cytosol, nucleus, plastid | 99.45 | 99.45 |
| TraesCS2A01G432800.1 | Wheat | cytosol, nucleus, plastid | 98.89 | 98.08 |
| HORVU2Hr1G101090.6 | Barley | plastid | 98.07 | 84.12 |
| Os04t0605300-01 | Rice | nucleus | 76.24 | 78.41 |
| KXG27059 | Sorghum | cytosol, nucleus, plastid | 76.8 | 76.58 |
| Zm00001d002402_P001 | Maize | cytosol, nucleus, plastid | 76.52 | 76.31 |
| Zm00001d002399_P001 | Maize | nucleus | 51.1 | 73.71 |
| VIT_11s0052g00390.t01 | Wine grape | cytosol | 53.04 | 62.34 |
| GSMUA_AchrUn_... | Banana | nucleus | 56.91 | 60.59 |
| GSMUA_Achr1P23570_001 | Banana | nucleus | 56.91 | 60.06 |
| KRH37361 | Soybean | cytosol | 54.42 | 55.49 |
| KRH02753 | Soybean | cytosol | 53.04 | 53.33 |
| KRH12356 | Soybean | cytosol | 53.31 | 53.17 |
| Solyc12g017480.1.1 | Tomato | cytosol | 51.66 | 51.37 |
| PGSC0003DMT400016538 | Potato | mitochondrion | 51.38 | 51.24 |
| CDY30187 | Canola | nucleus | 38.67 | 50.18 |
| AT4G26050.1 | Thale cress | cytosol | 52.76 | 49.87 |
| Bra013944.1-P | Field mustard | cytosol, plastid | 54.7 | 49.75 |
| CDX89369 | Canola | cytosol, plastid | 54.42 | 49.5 |
| Bra024119.1-P | Field mustard | cytosol | 50.0 | 49.45 |
| CDY42760 | Canola | cytosol, plastid | 53.59 | 49.11 |
| Bra019126.1-P | Field mustard | cytosol, plastid | 53.59 | 49.11 |
| CDX94383 | Canola | cytosol | 53.87 | 48.99 |
| CDY46713 | Canola | nucleus | 49.17 | 48.63 |
| AT4G29880.1 | Thale cress | nucleus | 50.0 | 48.53 |
| CDX82667 | Canola | nucleus, plastid | 50.55 | 47.66 |
| Bra038857.1-P | Field mustard | nucleus, plastid | 50.55 | 47.66 |
| CDY39144 | Canola | nucleus, plastid | 50.55 | 47.66 |
| CDX92748 | Canola | cytosol, plasma membrane, plastid | 49.17 | 47.59 |
| AT2G19330.1 | Thale cress | nucleus, plastid | 49.72 | 47.37 |
| TraesCS4B01G249200.1 | Wheat | cytosol, nucleus, plastid | 16.57 | 22.9 |
| TraesCS2B01G354900.1 | Wheat | plastid | 30.94 | 22.31 |
| TraesCS1B01G205800.2 | Wheat | cytosol | 28.73 | 19.44 |
| TraesCS7B01G143600.3 | Wheat | nucleus | 29.01 | 18.52 |
| TraesCS1B01G159200.1 | Wheat | cytosol | 18.23 | 17.69 |
| TraesCS6B01G456300.1 | Wheat | cytosol | 23.2 | 14.36 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G454100.1 | EnsemblPlantsGene:TraesCS2B01G454100 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PANTHER:PTHR44997 |
| PFAM:PF00560 | PFAM:PF13855 | PFscan:PS51450 | PRINTS:PR00019 | SEG:seg | SMART:SM00364 |
| SMART:SM00369 | SUPFAM:SSF52058 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2B:+:648481121..648482881
Molecular Weight (calculated)
39990.4 Da
IEP (calculated)
9.806
GRAVY (calculated)
-0.293
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDMAERRSR HGHGHANVVP FGAGAGGGLQ HGEHDQEKVK EKKLDMSGLS MDTIPHLTMS LGHITTLDLS NNNLESIPES MIARLLKVVV LDVRSNQLKS
101: LPNSIGCLSK LRVLNVSGNL LQSLPATIEE CRALEELNAN FNQLTRLPDT LGFELHSLRR LSVNSNKLTS LPFSTSHMTA LRALDARLNC IRALPEGLEN
201: LVNLEVLNVS QNFHFLRELP YGLGLLTSLR ELDISYNSIS VLPDSMGCLA KLNKFSAVGN PLVCPPMDIV EQSLDAMRTY LSSRMNGTGV NAKKKKGWLP
301: RMVKYNTFSA RMTPGRKSAH DNSEGFSMSD YHSLNGSASP GFLSMLSPRR LFSPRRDSPK HH
101: LPNSIGCLSK LRVLNVSGNL LQSLPATIEE CRALEELNAN FNQLTRLPDT LGFELHSLRR LSVNSNKLTS LPFSTSHMTA LRALDARLNC IRALPEGLEN
201: LVNLEVLNVS QNFHFLRELP YGLGLLTSLR ELDISYNSIS VLPDSMGCLA KLNKFSAVGN PLVCPPMDIV EQSLDAMRTY LSSRMNGTGV NAKKKKGWLP
301: RMVKYNTFSA RMTPGRKSAH DNSEGFSMSD YHSLNGSASP GFLSMLSPRR LFSPRRDSPK HH
001: MICEEAYHQQ PQIQKEQMMT MDQRNNHQRK RSPLSSPSSP SSPSSPSSPK SPSFNNNEEE RLEVVNLSGM ALESLPNPSL NLAQICKLDL SNNHLQTIPE
101: SLTARLLNLI ALDVHSNQIK ALPNSIGCLS KLKTLNVSGN FLVSFPKSIQ HCRSLEELNA NFNKLIRLPD SIGFELTNLR KLSINSNKLI SLPISITHLT
201: SLRVLDARLN CLMILPDDLE NLINLEILNV SQNFQYLSAL PSSIGLLMNL IELDVSYNKI TVLPESIGCM RRLRKLSVEG NPLVSPPIEV MEQNLQVVRE
301: YLTQKMNGGS PRSPSKKKSW GFGKLVKYGT FNGGSRSWNR EEREGFIMPE YRSIDSLASP RYSGMFSPRR LFSPRTYFSR
101: SLTARLLNLI ALDVHSNQIK ALPNSIGCLS KLKTLNVSGN FLVSFPKSIQ HCRSLEELNA NFNKLIRLPD SIGFELTNLR KLSINSNKLI SLPISITHLT
201: SLRVLDARLN CLMILPDDLE NLINLEILNV SQNFQYLSAL PSSIGLLMNL IELDVSYNKI TVLPESIGCM RRLRKLSVEG NPLVSPPIEV MEQNLQVVRE
301: YLTQKMNGGS PRSPSKKKSW GFGKLVKYGT FNGGSRSWNR EEREGFIMPE YRSIDSLASP RYSGMFSPRR LFSPRTYFSR
Arabidopsis Description
PIRL6Plant intracellular Ras-group-related LRR protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O64566]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.