Factsheet for TraesCS1B01G205800.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G190500.1	Wheat	cytosol	98.13	98.31
TraesCS1D01G194700.1	Wheat	cytosol	97.57	97.94
HORVU1Hr1G049900.1	Barley	cytosol, extracellular, mitochondrion, plastid	97.2	90.75
KXG38871	Sorghum	cytosol	78.69	78.25
Os10t0572300-01	Rice	plasma membrane	78.69	77.53
Zm00001d047045_P001	Maize	extracellular, mitochondrion, plasma membrane	77.2	77.34
Zm00001d030062_P001	Maize	cytosol	62.43	76.96
GSMUA_Achr4P19230_001	Banana	cytosol	60.19	61.8
GSMUA_Achr4P21530_001	Banana	cytosol	61.31	61.77
VIT_02s0012g01010.t01	Wine grape	cytosol	56.07	56.29
PGSC0003DMT400052889	Potato	cytosol	44.11	55.27
KRH04326	Soybean	cytosol	52.15	53.86
Solyc08g006970.2.1	Tomato	cytosol	50.09	52.76
TraesCS7B01G143600.3	Wheat	nucleus	47.48	44.8
KRH58211	Soybean	mitochondrion	18.69	42.37
TraesCS2B01G454100.1	Wheat	cytosol, nucleus, plastid	19.44	28.73
TraesCS4B01G249200.1	Wheat	cytosol, nucleus, plastid	13.27	27.1
TraesCS2B01G354900.1	Wheat	plastid	25.23	26.89
TraesCS1B01G159200.1	Wheat	cytosol	14.77	21.18
TraesCS6B01G456300.1	Wheat	cytosol	16.07	14.7

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0009416	GO:GO:0009628	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF13855	PFscan:PS51450	PANTHER:PTHR44513
PANTHER:PTHR44513:SF3	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	EnsemblPlantsGene:TraesCS1B01G205800	EnsemblPlants:TraesCS1B01G205800.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:371138841..371142537

Molecular Weight (calculated)

58360.1 Da

IEP (calculated)

4.753

GRAVY (calculated)

-0.067

Length

535 amino acids

Sequence
(BLAST)

001: MAAAAATADV VEELTRVYRE LPPRPAVEEV EAAAAVLASA DAEEEARLAE VAREEAARLR EAEGVSGELL AVLREARRAA VRLRALQQRK EAAHVVELER
101: RFKVLDGLIQ RASRVVSPSG EGSSAGGGGV ETEEVVEEMD ARRSDVAAAA AAVGEIERGN RGVGFGLDTK AVSSLLRNGS TGSDMVDQKL SLIQVASLIE
201: SSAKRGTTEL NLRGKLVDQI EWLPVSLGKL QDVTELDISE NRIMALPSTV GSLRYLTKLD IHSNQLINLP DTFGELSSLI DLDLHANQLK SLPVSFGNLT
301: SLANLDLSSN QFKILPDCIG KLMNLRRLIA ETNELEELPY TIGSCISLVE LRLDFNQLKA LPEGIGKLEK LEILTLHYNR IKGLPTTIGS LTRLRELDVS
401: FNEVEGIPES ICFATSLVKL NVSRNFADLR ALPRSIGNLE MLEELDISSN QIRMLPDSFE FLAKLRVFHA DETPLEVPPR EVIKLGAQAV VQYVADMVAS
501: RGASQKKTDG TSFWAWFRSL FGCCKKDEEL GLVPA

Best Arabidopsis Sequence Match ( AT2G17440.1 )
(BLAST)

001: MDSKEMVVEE IMRIHRSLPL RPEIDDVETA TSLIQNVEKE DRNRLEAIDK LVKTSSSEVP LELFNVFKEM KKSLVRFQST EQTREATKIL DLESVHVVFD
101: ELIQRASFCI ASPNSTTALP RSVPVPAPVV SSDEIPFKSK EIISRDDTFV KKAKSSFYSD GLLAPSKPQV LDSTLHQAKN VAGNDGEKLS LIKLASLIEV
201: SAKKATQELN LQHRLMDQLE WLPDSLGKLS SLVRLDLSEN CIMVLPATIG GLISLTRLDL HSNRIGQLPE SIGDLLNLVN LNLSGNQLSS LPSSFNRLIH
301: LEELDLSSNS LSILPESIGS LVSLKKLDVE TNNIEEIPHS ISGCSSMEEL RADYNRLKAL PEAVGKLSTL EILTVRYNNI RQLPTTMSSM ANLKELDVSF
401: NELESVPESL CYAKTLVKLN IGNNFANLRS LPGLIGNLEK LEELDMSNNQ IRFLPYSFKT LSNLRVLQTE QNPLEELPRD ITEKGAQAVV QYMNDLVEAR
501: NTKSQRTKPK KSWVNSICFF CKSSTN

Arabidopsis Description

PIRL5Plant intracellular Ras-group-related LRR protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5G5E0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.