Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G247900.2 | Wheat | cytosol | 97.53 | 97.02 |
| TraesCS7D01G246700.1 | Wheat | nucleus | 97.0 | 96.49 |
| Zm00001d031470_P001 | Maize | plasma membrane | 78.13 | 76.78 |
| Os08t0511700-00 | Rice | plasma membrane | 76.01 | 75.09 |
| EES14257 | Sorghum | nucleus | 76.54 | 75.09 |
| CDX72539 | Canola | nucleus | 42.68 | 61.58 |
| GSMUA_Achr8P25490_001 | Banana | nucleus | 59.61 | 61.12 |
| GSMUA_Achr5P23850_001 | Banana | cytosol | 58.38 | 60.07 |
| VIT_07s0031g02310.t01 | Wine grape | cytosol | 56.08 | 57.09 |
| KRH28950 | Soybean | cytosol | 56.97 | 56.97 |
| KRH76512 | Soybean | nucleus | 57.5 | 56.79 |
| Bra011617.1-P | Field mustard | cytosol | 45.5 | 56.46 |
| CDX75505 | Canola | cytosol | 53.62 | 56.3 |
| CDX69142 | Canola | cytosol | 53.26 | 55.51 |
| AT4G35470.1 | Thale cress | nucleus | 53.26 | 55.01 |
| KRH39397 | Soybean | nucleus | 53.26 | 54.81 |
| CDY66405 | Canola | cytosol | 47.97 | 54.4 |
| KRH07815 | Soybean | cytosol | 52.56 | 54.38 |
| CDY40632 | Canola | nucleus | 52.2 | 54.31 |
| Bra017712.1-P | Field mustard | nucleus | 52.2 | 54.31 |
| Bra024514.1-P | Field mustard | cytosol | 47.8 | 54.2 |
| CDY07843 | Canola | nucleus | 47.44 | 53.8 |
| PGSC0003DMT400059678 | Potato | nucleus | 53.09 | 52.9 |
| AT2G17440.1 | Thale cress | cytosol | 48.68 | 52.47 |
| Bra037271.1-P | Field mustard | cytosol | 47.62 | 52.43 |
| CDY30364 | Canola | cytosol | 47.09 | 52.25 |
| Solyc02g082350.2.1 | Tomato | nucleus | 52.38 | 51.47 |
| PGSC0003DMT400035497 | Potato | cytosol | 51.68 | 51.22 |
| CDY26809 | Canola | nucleus | 47.97 | 50.94 |
| TraesCS1B01G205800.2 | Wheat | cytosol | 44.8 | 47.48 |
| TraesCS4B01G249200.1 | Wheat | cytosol, nucleus, plastid | 14.11 | 30.53 |
| TraesCS2B01G454100.1 | Wheat | cytosol, nucleus, plastid | 18.52 | 29.01 |
| GSMUA_Achr6P03430_001 | Banana | nucleus | 22.22 | 26.69 |
| TraesCS2B01G354900.1 | Wheat | plastid | 23.63 | 26.69 |
| TraesCS1B01G159200.1 | Wheat | cytosol | 13.76 | 20.91 |
| TraesCS6B01G456300.1 | Wheat | cytosol | 16.23 | 15.73 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G143600.3 | EnsemblPlantsGene:TraesCS7B01G143600 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PANTHER:PTHR44513 |
| PANTHER:PTHR44513:SF1 | PFAM:PF00560 | PFAM:PF13855 | PFscan:PS51450 | SEG:seg | SMART:SM00364 |
| SMART:SM00369 | SUPFAM:SSF52058 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr7B:+:184337032..184339440
Molecular Weight (calculated)
61587.0 Da
IEP (calculated)
7.004
GRAVY (calculated)
-0.212
Length
567 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAAAFGTL EGVVGEITRL HRSLPARPTL DDVEAAEALA RAADREERAR LDAVEALRRS PLVPEELFYV AQEMHRALAG FQCREQKRDA TRILELDALH
101: ALFDDLIQRA SQCLPSTSTG AAPRITSTGG AASSSSASSA GPLPAAGRSS LVTNGFSAER TVGTSMGRVS MDDSYVKKAK APMWDGGVVA ASPRKPGGTV
201: SANSAAVRLD DSYGDDKEKM SLIKLASMIE VAAKKGAREL NFKGKLMAQI EWIPDSIGKL TGLVTLDISE NRLVALPPTI GKLSSLTKLD LHANRIAQLP
301: DSVGDLRSLI CLDLRGNQLT SLPSSIGRLA NLEELDVGAN HIVSLPDSVG SLTRLKKLLV ETNDLDELPY TIGHCVSLVE LQAGYNHLKA LPEAVGKLES
401: LEILSVRYNN IRSLPTTMAS LTKLKEVDAS FNELESIPEN FCFVTSLVKL NVGNNFADMQ SLPRSIGNLE MLEELDISNN QIRVLPDSFG MLQHLRVLRA
501: EENPLQVPPR ERALKGAQAA VQYMAEYAAK KTTKPQPAKA KKNWAQFCFF SRPNKRKHDR IDTDMID
101: ALFDDLIQRA SQCLPSTSTG AAPRITSTGG AASSSSASSA GPLPAAGRSS LVTNGFSAER TVGTSMGRVS MDDSYVKKAK APMWDGGVVA ASPRKPGGTV
201: SANSAAVRLD DSYGDDKEKM SLIKLASMIE VAAKKGAREL NFKGKLMAQI EWIPDSIGKL TGLVTLDISE NRLVALPPTI GKLSSLTKLD LHANRIAQLP
301: DSVGDLRSLI CLDLRGNQLT SLPSSIGRLA NLEELDVGAN HIVSLPDSVG SLTRLKKLLV ETNDLDELPY TIGHCVSLVE LQAGYNHLKA LPEAVGKLES
401: LEILSVRYNN IRSLPTTMAS LTKLKEVDAS FNELESIPEN FCFVTSLVKL NVGNNFADMQ SLPRSIGNLE MLEELDISNN QIRVLPDSFG MLQHLRVLRA
501: EENPLQVPPR ERALKGAQAA VQYMAEYAAK KTTKPQPAKA KKNWAQFCFF SRPNKRKHDR IDTDMID
001: MDLMQMDKRL DSTEQVVEEI MRIHRSLPAR PGIDEVEAAK GLIDNVEKED QACLEAIARQ RKSSEVPGEL FMVLQEMKKG YVQFRSKEQI REALKLLDLE
101: SVHSLFDDFI QRASNCIASP SSNGSVSSRP PLPPATTTAA RSDSQSSLNF SERAPVRPKD MVSRDDSFVT KSKPSSLYSD GFAAPPRRPQ ILDSTLTTGN
201: DGEKLSLIKL ASLIEVSAKK ATQEINLQNK LTEQLEWLPD SLGKLSSLTS LDLSENHIVV LPNTIGGLSS LTKLDLHSNR IGQLPESIGE LLNLVYLNLG
301: SNQLSSLPSA FSRLVRLEEL DLSCNNLPIL PESIGSLVSL KKLDVETNDI EEIPYSIGGC SSLIELRADY NKLKALPEAI GKITTLEILS VRYNNIRQLP
401: TTMSSLASLK ELDVSFNELE SVPESLCFAT TLVKLNIGNN FADMVSLPRS IGNLEMLEEL DISNNQIRVL PDSFKMLTKL RVFRAQENPL HIPPRDIAEK
501: GPQAVVQYMN DLVETRNAKS LMVKPKKSWV QMCFFSKSNK RKQSSMEIV
101: SVHSLFDDFI QRASNCIASP SSNGSVSSRP PLPPATTTAA RSDSQSSLNF SERAPVRPKD MVSRDDSFVT KSKPSSLYSD GFAAPPRRPQ ILDSTLTTGN
201: DGEKLSLIKL ASLIEVSAKK ATQEINLQNK LTEQLEWLPD SLGKLSSLTS LDLSENHIVV LPNTIGGLSS LTKLDLHSNR IGQLPESIGE LLNLVYLNLG
301: SNQLSSLPSA FSRLVRLEEL DLSCNNLPIL PESIGSLVSL KKLDVETNDI EEIPYSIGGC SSLIELRADY NKLKALPEAI GKITTLEILS VRYNNIRQLP
401: TTMSSLASLK ELDVSFNELE SVPESLCFAT TLVKLNIGNN FADMVSLPRS IGNLEMLEEL DISNNQIRVL PDSFKMLTKL RVFRAQENPL HIPPRDIAEK
501: GPQAVVQYMN DLVETRNAKS LMVKPKKSWV QMCFFSKSNK RKQSSMEIV
Arabidopsis Description
PIRL4Plant intracellular Ras-group-related LRR protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVW8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.