Factsheet for Bra037271.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30364	Canola	cytosol	96.5	97.26
CDY26809	Canola	nucleus	94.56	91.2
Bra024514.1-P	Field mustard	cytosol	83.5	86.0
AT2G17440.1	Thale cress	cytosol	81.55	79.85
Bra011617.1-P	Field mustard	cytosol	56.5	63.68
Bra017712.1-P	Field mustard	nucleus	66.99	63.3
KRH39397	Soybean	nucleus	63.69	59.53
KRH28950	Soybean	cytosol	65.24	59.26
KRH76512	Soybean	nucleus	65.44	58.71
VIT_07s0031g02310.t01	Wine grape	cytosol	63.5	58.71
KRH07815	Soybean	cytosol	62.33	58.58
GSMUA_Achr8P25490_001	Banana	nucleus	60.39	56.24
GSMUA_Achr5P23850_001	Banana	cytosol	59.81	55.9
PGSC0003DMT400059678	Potato	nucleus	61.55	55.71
PGSC0003DMT400035497	Potato	cytosol	61.55	55.42
Solyc02g082350.2.1	Tomato	nucleus	60.78	54.25
Os08t0511700-00	Rice	plasma membrane	54.56	48.95
EES14257	Sorghum	nucleus	53.59	47.75
TraesCS7B01G143600.3	Wheat	nucleus	52.43	47.62
TraesCS7A01G247900.2	Wheat	cytosol	52.04	47.02
TraesCS7D01G246700.1	Wheat	nucleus	51.65	46.67
Zm00001d031470_P001	Maize	plasma membrane	51.84	46.27
Bra032935.1-P	Field mustard	plastid	24.47	28.25
Bra028680.1-P	Field mustard	cytosol	14.17	27.65
Bra005960.1-P	Field mustard	cytosol, mitochondrion, nucleus	13.79	27.1
Bra026944.1-P	Field mustard	cytosol	23.88	26.57
Bra009140.1-P	Field mustard	cytosol	25.63	26.19
Bra034849.1-P	Field mustard	plastid	25.05	25.96
Bra024119.1-P	Field mustard	cytosol	18.25	25.68
Bra013944.1-P	Field mustard	cytosol, plastid	19.81	25.63
Bra001399.1-P	Field mustard	plastid	24.66	25.5
Bra038857.1-P	Field mustard	nucleus, plastid	18.84	25.26
Bra019126.1-P	Field mustard	cytosol, plastid	19.22	25.06
GSMUA_Achr6P03430_001	Banana	nucleus	20.58	22.46
Bra021606.1-P	Field mustard	cytosol	13.01	18.46
Bra027245.1-P	Field mustard	nucleus	18.64	16.41
Bra034850.1-P	Field mustard	nucleus	1.36	11.11

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EnsemblPlantsGene:Bra037271	EnsemblPlants:Bra037271.1	EnsemblPlants:Bra037271.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M4F860	PFAM:PF00560	PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR44513
PANTHER:PTHR44513:SF1	SMART:SM00364	SMART:SM00365	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0002541DFC
SEG:seg	:	:	:	:	:

Description

AT2G17440 (E=3e-219) | leucine-rich repeat family protein

Coordinates

chrA09:+:4620976..4622689

Molecular Weight (calculated)

57490.1 Da

IEP (calculated)

5.296

GRAVY (calculated)

-0.258

Length

515 amino acids

Sequence
(BLAST)

001: MNQVVEEIMS IHRSLPPRPD IDDVEAATSL IQNVENDDQS RLDAVDREIK SSGVPQELFD VLQEMRRGLV RFQSKEQKRE AAKVLDLESA HVVFDELIQR
101: AYANLSRPPL APVVSPASLY CSDEAHVKSK DMFTRDDTFV NKVKSSLYSD GFLAPRKPQV LDSTTLQAKN LTGHDGEKLS LIKLATLIEV SAKKATQELN
201: LQHKLMDNLE WLPDSLGKLS SLVRLDLSEN CIMALPATIG GLLSLTRLDL QSNRIGQLPE SIGDLMNLVN LNLSGNQLTS LPSSLSRLVN LEELDLSSNS
301: LSVLPETIGS IVSLEKLDVE TNNIEEIPHS ISGCSSLKEL RADYNRLKAL PEAVGKITTL EILSVRYNNI RQLPTTMSSM ANLKELDVSF NELESVPESL
401: CYATTLVKLN IGNNFANLRS LPGLIGNLEK LEELDMSNNQ IRYLPYSFKA LSQLRVLHTQ QNPLEELPRD IIKKGAQAVV QYMNDLVEAR NTKCQRTKQN
501: KSWVVRICFL CKSTN

Best Arabidopsis Sequence Match ( AT2G17440.1 )
(BLAST)

001: MDSKEMVVEE IMRIHRSLPL RPEIDDVETA TSLIQNVEKE DRNRLEAIDK LVKTSSSEVP LELFNVFKEM KKSLVRFQST EQTREATKIL DLESVHVVFD
101: ELIQRASFCI ASPNSTTALP RSVPVPAPVV SSDEIPFKSK EIISRDDTFV KKAKSSFYSD GLLAPSKPQV LDSTLHQAKN VAGNDGEKLS LIKLASLIEV
201: SAKKATQELN LQHRLMDQLE WLPDSLGKLS SLVRLDLSEN CIMVLPATIG GLISLTRLDL HSNRIGQLPE SIGDLLNLVN LNLSGNQLSS LPSSFNRLIH
301: LEELDLSSNS LSILPESIGS LVSLKKLDVE TNNIEEIPHS ISGCSSMEEL RADYNRLKAL PEAVGKLSTL EILTVRYNNI RQLPTTMSSM ANLKELDVSF
401: NELESVPESL CYAKTLVKLN IGNNFANLRS LPGLIGNLEK LEELDMSNNQ IRFLPYSFKT LSNLRVLQTE QNPLEELPRD ITEKGAQAVV QYMNDLVEAR
501: NTKSQRTKPK KSWVNSICFF CKSSTN

Arabidopsis Description

PIRL5Plant intracellular Ras-group-related LRR protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5G5E0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.