Factsheet for Bra027245.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97667	Canola	nucleus	97.61	97.61
CDY56828	Canola	nucleus	96.92	96.92
AT3G15410.2	Thale cress	cytosol, mitochondrion, nucleus	91.45	90.68
VIT_19s0014g03000.t01	Wine grape	cytosol, mitochondrion	72.31	72.43
KRH27219	Soybean	cytosol	71.62	71.5
KRH22120	Soybean	cytosol	70.94	71.18
Solyc10g006930.2.1	Tomato	cytosol	69.06	69.18
GSMUA_Achr4P04360_001	Banana	cytosol	66.32	66.32
HORVU6Hr1G093360.11	Barley	nucleus	41.88	66.04
EES07794	Sorghum	cytosol	63.93	63.82
Os02t0826600-01	Rice	cytosol	63.42	63.31
TraesCS6D01G393300.1	Wheat	cytosol	63.42	63.31
TraesCS6B01G456300.1	Wheat	cytosol	62.91	62.91
Zm00001d018525_P004	Maize	cytosol	64.1	60.1
TraesCS6A01G410200.1	Wheat	cytosol, plasma membrane, plastid	63.25	57.1
Bra005960.1-P	Field mustard	cytosol, mitochondrion, nucleus	13.16	29.39
Bra028680.1-P	Field mustard	cytosol	12.99	28.79
Bra024119.1-P	Field mustard	cytosol	14.53	23.22
Bra013944.1-P	Field mustard	cytosol, plastid	15.73	23.12
Bra038857.1-P	Field mustard	nucleus, plastid	14.7	22.4
Bra019126.1-P	Field mustard	cytosol, plastid	15.04	22.28
Bra032935.1-P	Field mustard	plastid	15.9	20.85
Bra026944.1-P	Field mustard	cytosol	16.24	20.52
Bra009140.1-P	Field mustard	cytosol	17.44	20.24
Bra011617.1-P	Field mustard	cytosol	15.73	20.13
Bra001399.1-P	Field mustard	plastid	16.24	19.08
Bra034849.1-P	Field mustard	plastid	16.07	18.91
Bra024514.1-P	Field mustard	cytosol	16.07	18.8
Bra037271.1-P	Field mustard	cytosol	16.41	18.64
Bra021606.1-P	Field mustard	cytosol	11.28	18.18
Bra034850.1-P	Field mustard	nucleus	1.88	17.46
Bra017712.1-P	Field mustard	nucleus	15.73	16.88

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EnsemblPlantsGene:Bra027245	EnsemblPlants:Bra027245.1	EnsemblPlants:Bra027245.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M4EEN3	PFAM:PF00560	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450
PANTHER:PTHR44126	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0002547A28	SEG:seg

Description

AT3G15410 (E=2e-247) | leucine-rich repeat family protein

Coordinates

chrA05:-:19925627..19929549

Molecular Weight (calculated)

64153.8 Da

IEP (calculated)

6.718

GRAVY (calculated)

-0.127

Length

585 amino acids

Sequence
(BLAST)

001: MDRILKAART SGSLNLSNRS LREVPTEVYQ CLETTGEGEN WWEAVDLQKL ILAHNEIEVL REDLKNLACL VVLNVSHNKL SQLPAAIGEL TAMKSLDVSF
101: NSISELPEQI GSATSLVKLD CSSNRLKELP ESLGRCLDLS DLKASNNQIS SLHEDMANCS KLSKLDVEGN KLTALSERQI ASWTMLTELN ASKNMLVDLP
201: QNIGSLSRLI RLDLHQNKIS SIPPSIGGCS SLVEFYLGMN SLSTLPAEIG DLSRLGTLDL RSNQLKEYPV GGCKLKLSYL DLSNNSLTGL HPELGNMTTL
301: KKLVLVGNPL RTLRSTLVNG PTAALLKYLR SRLSNGEETS ASTPTKENVI ASAARMSISS KELSLEGLNL TAVPSQVWES GEITKVNLSK NSIEELPTQL
401: SSSVSLQTLI LSRNKIKDWP GEILKLLPGL VCLKLDNNLL KQIPLDGFQA VSGLQILDIS GNAASLSIKE HPKFSHMPQL QELYLSRVQL SEVPEDILNL
501: SNLLILDLSQ NSLQSIPKDI KKMTSLKHLD ISNNNISSLP PELGLLEPTL EVLRLDGNPL RSIRRPILER GTKAVLNYLK DRIPV

Best Arabidopsis Sequence Match ( AT3G15410.1 )
(BLAST)

001: MDRILKAART SGSLNLSNRS LKDVPTEVYQ CLETTGEGEN WWEAVDLQKL ILAHNDIEVL REDLKNLACL VVLNVSHNKL SQLPAAIGEL TAMKSLDVSF
101: NSISELPEQI GSAISLVKLD CSSNRLKELP DSIGRCLDLS DLKATNNQIS SLPEDMVNCS KLSKLDVEGN KLTALSENHI ASWTMLAELN ACKNMLGVLP
201: QNIGSLSRLI RLDLHQNKIS SVPPSIGGCS SLVEFYLGIN SLSTLPAEIG DLSRLGTLDL RSNQLKEYPV GACKLKLSYL DLSNNSLTGL HPELGNMTTL
301: RKLVLVGNPL RTLRSSLVNG PTAALLKYLR SRLSNSEETS ASTPTKENVI ASAARMSISS KELSLEGLNL SDVPSEVWES GEITKVNLSK NSIEELPAQL
401: STSVSLQTLI LSRNKIKDWP GAILKSLPNL MCLKLDNNPL NQIPLDGFQV VSGLQILDLS VNAVSFREHP KFCHLPQLRE LYLSRIQLSE VPEDILNLSN
501: LIILDLNQNS LQSIPKGIKN MTSLKHLDIS NNNISSLPPE LGLLEPTLEV LRLDGNPLRS IRRPILERGT KAVLNYLKDR LPDQ

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4IYR7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.