Factsheet for Bra038857.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82667	Canola	nucleus, plastid	100.0	100.0
CDY39144	Canola	nucleus, plastid	100.0	100.0
AT2G19330.1	Thale cress	nucleus, plastid	91.93	92.89
Bra024119.1-P	Field mustard	cytosol	75.78	79.51
VIT_11s0052g00390.t01	Wine grape	cytosol	57.03	71.1
KRH02753	Soybean	cytosol	61.98	66.11
GSMUA_AchrUn_...	Banana	nucleus	54.95	62.06
KRH37361	Soybean	cytosol	57.29	61.97
GSMUA_Achr1P23570_001	Banana	nucleus	54.95	61.52
PGSC0003DMT400016538	Potato	mitochondrion	57.55	60.88
KRH12356	Soybean	cytosol	56.77	60.06
Solyc12g017480.1.1	Tomato	cytosol	56.25	59.34
Zm00001d002399_P001	Maize	nucleus	36.46	55.78
Os04t0605300-01	Rice	nucleus	51.04	55.68
Bra019126.1-P	Field mustard	cytosol, plastid	57.03	55.44
Bra013944.1-P	Field mustard	cytosol, plastid	56.25	54.27
KXG27059	Sorghum	cytosol, nucleus, plastid	50.78	53.72
Zm00001d002402_P001	Maize	cytosol, nucleus, plastid	50.78	53.72
TraesCS2A01G432800.1	Wheat	cytosol, nucleus, plastid	48.44	50.96
TraesCS2D01G430800.1	Wheat	cytosol, nucleus, plastid	47.92	50.83
TraesCS2B01G454100.1	Wheat	cytosol, nucleus, plastid	47.66	50.55
HORVU2Hr1G101090.6	Barley	plastid	48.7	44.31
Bra026944.1-P	Field mustard	cytosol	32.03	26.57
Bra032935.1-P	Field mustard	plastid	30.47	26.23
Bra034849.1-P	Field mustard	plastid	33.85	26.16
Bra001399.1-P	Field mustard	plastid	32.81	25.3
Bra009140.1-P	Field mustard	cytosol	31.51	24.01
Bra011617.1-P	Field mustard	cytosol	28.12	23.63
Bra028680.1-P	Field mustard	cytosol	15.1	21.97
Bra005960.1-P	Field mustard	cytosol, mitochondrion, nucleus	14.84	21.76
Bra024514.1-P	Field mustard	cytosol	26.82	20.6
Bra017712.1-P	Field mustard	nucleus	27.6	19.45
Bra037271.1-P	Field mustard	cytosol	25.26	18.84
Bra021606.1-P	Field mustard	cytosol	15.36	16.25
Bra027245.1-P	Field mustard	nucleus	22.4	14.7
Bra034850.1-P	Field mustard	nucleus	2.08	12.7

Protein Annotations

EnsemblPlants:Bra038857.1	EnsemblPlants:Bra038857.1-P	EnsemblPlantsGene:Bra038857	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PANTHER:PTHR44997	PFAM:PF13855	PFscan:PS51450	SEG:seg	SMART:SM00364	SMART:SM00369
SUPFAM:SSF52058	UniParc:UPI000254101B	UniProt:M4FCN8	MapMan:35.1	:	:

Description

AT2G19330 (E=1e-171) | leucine-rich repeat family protein

Coordinates

chrA07:-:960977..962762

Molecular Weight (calculated)

43141.3 Da

IEP (calculated)

9.461

GRAVY (calculated)

-0.302

Length

384 amino acids

Sequence
(BLAST)

001: MICEETYHQQ PQAPIKEHMM TMMMMDQHQS RKSPLSSSPS SPSSSPRSPS SPRSPSFNIN NEEERLEVVN MSGMALESLP NPSINLAQIC KLDLSNNYLQ
101: TIPESLTARL LNLIALDVHS NQLKALPNSI GCLSKLKTLN VSGNFLVSLP KSIQHCRSLE ELNANFNKLI RLPDSIGYEL TNLRKLSVNS NKLISLPISI
201: THLTSLRALD ARLNCLMILP DDLENLINLE ILNVSQNFQY LTALPSSIGL LMNLIELDVS YNKITVLPES IGCMRRLRKL SVEGNPLVSP PAEVMEQNLQ
301: VVREYLTQKI NGTAPKSPSK KKSWGFGKLV KYGTFNGGSR SWNREEREGF IMPEYRSIDS LASPRYSGMF SPRRLFSPRS YFSR

Best Arabidopsis Sequence Match ( AT2G19330.1 )
(BLAST)

001: MICEEAYHQQ PQIQKEQMMT MDQRNNHQRK RSPLSSPSSP SSPSSPSSPK SPSFNNNEEE RLEVVNLSGM ALESLPNPSL NLAQICKLDL SNNHLQTIPE
101: SLTARLLNLI ALDVHSNQIK ALPNSIGCLS KLKTLNVSGN FLVSFPKSIQ HCRSLEELNA NFNKLIRLPD SIGFELTNLR KLSINSNKLI SLPISITHLT
201: SLRVLDARLN CLMILPDDLE NLINLEILNV SQNFQYLSAL PSSIGLLMNL IELDVSYNKI TVLPESIGCM RRLRKLSVEG NPLVSPPIEV MEQNLQVVRE
301: YLTQKMNGGS PRSPSKKKSW GFGKLVKYGT FNGGSRSWNR EEREGFIMPE YRSIDSLASP RYSGMFSPRR LFSPRTYFSR

Arabidopsis Description

PIRL6Plant intracellular Ras-group-related LRR protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O64566]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.