Factsheet for Bra026944.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26604	Canola	cytosol	99.57	99.57
AT1G12970.1	Thale cress	cytosol	82.94	82.76
Bra032935.1-P	Field mustard	plastid	60.48	62.78
KRH74520	Soybean	cytosol	53.13	53.36
GSMUA_Achr1P13500_001	Banana	plastid	51.4	48.67
HORVU7Hr1G066320.3	Barley	cytosol	29.16	48.21
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	48.6	44.91
Bra034849.1-P	Field mustard	plastid	47.52	44.27
Bra001399.1-P	Field mustard	plastid	46.87	43.57
Bra009140.1-P	Field mustard	cytosol	47.3	43.45
TraesCS6D01G191800.1	Wheat	plastid	46.22	43.41
TraesCS2A01G327100.1	Wheat	cytosol, plastid	46.87	43.14
TraesCS2D01G335800.1	Wheat	cytosol, plastid	46.65	43.03
TraesCS2B01G354900.1	Wheat	plastid	46.65	43.03
HORVU2Hr1G082540.6	Barley	cytosol, mitochondrion	37.58	42.44
EES05350	Sorghum	plastid	45.79	42.15
Os02t0593600-01	Rice	plasma membrane	45.36	41.92
Zm00001d025681_P001	Maize	plasma membrane	44.92	41.43
EES10994	Sorghum	plastid	45.57	41.29
HORVU6Hr1G053210.1	Barley	cytosol, plastid	45.14	40.5
Zm00001d017071_P002	Maize	plastid	46.0	40.26
Bra024119.1-P	Field mustard	cytosol	25.7	32.51
Bra038857.1-P	Field mustard	nucleus, plastid	26.57	32.03
Bra034850.1-P	Field mustard	nucleus	4.32	31.75
Bra019126.1-P	Field mustard	cytosol, plastid	26.35	30.89
Bra013944.1-P	Field mustard	cytosol, plastid	25.49	29.65
Bra005960.1-P	Field mustard	cytosol, mitochondrion, nucleus	15.12	26.72
Bra028680.1-P	Field mustard	cytosol	15.12	26.52
Bra011617.1-P	Field mustard	cytosol	25.27	25.6
Bra024514.1-P	Field mustard	cytosol	26.78	24.8
Bra037271.1-P	Field mustard	cytosol	26.57	23.88
Bra017712.1-P	Field mustard	nucleus	26.78	22.75
Bra021606.1-P	Field mustard	cytosol	16.2	20.66
Bra027245.1-P	Field mustard	nucleus	20.52	16.24

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EnsemblPlantsGene:Bra026944	EnsemblPlants:Bra026944.1	EnsemblPlants:Bra026944.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0046777	GO:GO:0055046	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M4EDT4	PFAM:PF13855	PFscan:PS51450	PANTHER:PTHR44373
PANTHER:PTHR44373:SF1	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0002542F7F	SEG:seg

Description

AT1G12970 (E=7e-213) | leucine-rich repeat family protein

Coordinates

chrA09:-:34426962..34428797

Molecular Weight (calculated)

51350.9 Da

IEP (calculated)

4.412

GRAVY (calculated)

-0.279

Length

463 amino acids

Sequence
(BLAST)

001: MDHDLEIFPL LSYALHHSDP ASHAPPSLSV QHSLANRYPL LTNPHVISTL IESIPSTITQ TLHVFASLGP RPDPSSVSSA RAKIAQIRET DPSSLSPEDA
101: AKEEQIYVTV VKLEEVHEGY EKQLRGLEEK LSEVYASAVE SLDGGDEVNE EVLEILDGGG VERIDLSDRR LKLLPEALGN NVSLVSLNLS RNDLKLLPDT
201: ISGLEKLEEL DVSSNLLESL PDSFGLLLNL RVLNVSGNKL TYLPESITQC RSLVELDASF NNLASLPANI GYGLLNLERL SIHLNKLRYF PNSICEMRSL
301: RYLDAHMNEI HGLPIAIGRL TSLEVLNLSS NFSDLTELPD TISDLANLKE LDVSNNQIRV LPDSFFRLEK LEKLNLDQNP LEFPPQEMVN QGAEGVREYM
401: RKRWEEMAEE EQLRSVIEAE KQQGGVTGWL SWGSSIVSNL LSGGTQSGGA NKPKEDSYMD QLL

Best Arabidopsis Sequence Match ( AT1G12970.1 )
(BLAST)

001: MDHDLEIFPL LSYVLHHSDP ASHAPPSLAI QQSLANRYPL LTNPYVISSL IESIPSTITQ TLFVFGSLGP RPDPLAVSSA RSKIREIKEN DSLSPEDAAK
101: EEQVYAAVVS LEEVHEGYEK QLRDLEEEIG RVYASAVESL SGGDEVNEEV LAVIKDAEDG GVVERIDLSD HELKLLPDAL GKIVGLVSLN VSRNNLRFLP
201: DTISGLEKLE ELDLSSNRLV FLPDSIGLLL NLRILNVTGN KLTLLPESIA QCRSLVELDA SFNNLTSLPA NFGYGLLNLE RLSIQLNKIR FFPNSICEMR
301: SLRYLDAHMN EIHGLPIAIG RLTNLEVMNL SSNFSDLIEL PDTISDLANL RELDLSNNQI RVLPDSFFRL EKLEKLNLDQ NPLEYPPQEM VNQSAEAVRE
401: FMRKRWEEMV EEEQLRSVIE AEKQQGGATG WLSWGSSIVT SLFSGGTHGG AAKKPKNSFL DEQL

Arabidopsis Description

PIRL3Plant intracellular Ras-group-related LRR protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4Q3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.