CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
extracellular 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017071_P002	Maize	plastid	90.46	86.01
Os02t0593600-01	Rice	plasma membrane	72.96	73.25
TraesCS6D01G191800.1	Wheat	plastid	69.38	70.79
HORVU6Hr1G053210.1	Barley	cytosol, plastid	70.18	68.41
EES10994	Sorghum	plastid	61.83	60.86
GSMUA_Achr1P13500_001	Banana	plastid	53.48	55.01
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	53.88	54.09
CDX70122	Canola	cytosol	48.71	50.72
CDX98871	Canola	cytosol	48.71	50.72
VIT_17s0000g09230.t01	Wine grape	cytosol	45.13	50.56
CDY00732	Canola	cytosol	42.54	49.77
CDX73881	Canola	cytosol	42.35	49.53
Bra009140.1-P	Field mustard	cytosol	49.3	49.21
CDY01012	Canola	plastid	46.12	48.54
AT5G05850.1	Thale cress	plastid	48.51	48.22
KRH63625	Soybean	nucleus	49.11	48.15
KRH57134	Soybean	plastid	48.91	48.14
KRH74520	Soybean	cytosol	43.54	47.51
Solyc03g112270.2.1	Tomato	cytosol, nucleus, plastid	49.5	47.34
Bra034849.1-P	Field mustard	plastid	46.72	47.28
AT3G11330.1	Thale cress	plastid	46.52	46.89
Bra001399.1-P	Field mustard	plastid	46.32	46.79
CDY08535	Canola	plastid	46.12	46.68
AT1G12970.1	Thale cress	cytosol	42.94	46.55
PGSC0003DMT400046655	Potato	cytosol	48.11	46.01
CDY26604	Canola	cytosol	42.35	46.0
CDY16042	Canola	cytosol	42.35	46.0
Bra026944.1-P	Field mustard	cytosol	42.15	45.79
CDY69629	Canola	cytosol	29.22	43.24
Bra032935.1-P	Field mustard	plastid	37.77	42.6
CDY48988	Canola	cytosol	39.16	41.65
AT3G26500.1	Thale cress	cytosol	38.57	41.19
KXG27059	Sorghum	cytosol, nucleus, plastid	23.46	32.51
EER95291	Sorghum	cytosol	13.72	26.34
KXG38871	Sorghum	cytosol	26.84	25.09
EES14257	Sorghum	nucleus	26.44	23.01
EER94139	Sorghum	cytosol	16.9	22.73
EES07794	Sorghum	cytosol	18.49	15.87

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:8056465	UniProt:C5XWH1	ncoils:Coil	EnsemblPlants:EES05350
ProteinID:EES05350	ProteinID:EES05350.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF13855	PFscan:PS51450
PANTHER:PTHR44373	PANTHER:PTHR44373:SF2	SMART:SM00364	SMART:SM00369	EnsemblPlantsGene:SORBI_3004G200100	SUPFAM:SSF52058
UniParc:UPI0001A851E6	RefSeq:XP_002452374.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:55074936..55077124

Molecular Weight (calculated)

55559.2 Da

IEP (calculated)

4.850

GRAVY (calculated)

-0.349

Length

503 amino acids

Sequence
(BLAST)

001: MDPTPQSHPI LNYVLSRLPS LPAVRTPRSA PERDLEQPSP RRPLGAAEID LVGRMPGLRH PSVLSAMTRA VADVASARDA IDLLGPRPDH EQVDAARELL
101: LLADAGDKAD ADEEEKAKEL DEEKVAASRE VVRLDKEHEA YEALLRAAEE KLEHVYRMAM HGRDIKEAGG GDAKWEERSG AVDEEVVRVL KDAEEGKVVE
201: RVNLADRQLH LLPEPVGRIR GLLALDVSRN RLKEVPDAIG GLEHLEELRL ASNDLVSLPD SIGLLSNLKI LDVSGNRLRV LPDTISKCRS LMELDASYNA
301: LAYLPTGIGH ELVHLQTLRV HLNKLRSLPS SVCEMRSLRL LDAHFNELHG LPAAIGQLSA LETLDLSSNF SDMRDLPPSF GDLAGLRELD LSNNQIRALP
401: DCFGRLGKLE RLRLDQNPLA VPPPEVVADG VVAVNEYMAR RWAEAVAEEE QRRASAAAVA ESPRVSTPRE WLTRSVSSLS TWAVKVVGQD KVDEEDEFLQ
501: QQF

Best Arabidopsis Sequence Match ( AT5G05850.1 )
(BLAST)

001: MATELNPKNF PVLSYVLDRL PSFTAKSSSS SDVEPPPSKS DPSSSSNHSI EIVTQMPHLA HPDVLASMTN ATADVSQTRS VLRTLGPRPD HETVDRARAR
101: LREIDASLSE SFEEIALSPN DIDVAEKEQK RREAVEQEKI WYKSILKLNE LHESYEKLLK EAEERLVRIY ESAEKNAAAV AEEEAAEVEV NEEVVSILQQ
201: AAENPLDRVD LSGRKLKLLP EAFGKIQGLL VLNLYNNQLQ AIPDSIAGLH NLLELDVSTN FLETLPDSIG LLSKLKILNV SCNKLTTLPD SICHCGSLVV
301: LDASYNNLTY LPTNIGFELV KLEKLLIHLN KIRSLPTSIG EMRSLRYLDA HFNELNGLPN SFGLLTNLEY LNLSSNFSDL QDLPASFGDL ISLQELDLSN
401: NQIHSLPDAF GTLVNLTKLN LDQNPLVVPP DEVVKQGVDA VKMYMGKRWV SMLEEEEKMA NMKDEMDQTN TDWLTRTTSK LKTYVTEVSE YLGSNPPRDP
501: YLDQQL

Arabidopsis Description

PIRL1Plant intracellular Ras-group-related LRR protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFJ3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.