CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025681_P001	Maize	plasma membrane	89.24	90.84
TraesCS2D01G335800.1	Wheat	cytosol, plastid	79.84	81.27
TraesCS2B01G354900.1	Wheat	plastid	79.84	81.27
TraesCS2A01G327100.1	Wheat	cytosol, plastid	79.65	80.91
HORVU2Hr1G082540.6	Barley	cytosol, mitochondrion	53.23	66.34
HORVU7Hr1G066320.3	Barley	cytosol	34.05	62.14
EES05350	Sorghum	plastid	60.86	61.83
GSMUA_Achr1P13500_001	Banana	plastid	56.16	58.69
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	56.56	57.68
CDX73881	Canola	cytosol	46.38	55.12
VIT_17s0000g09230.t01	Wine grape	cytosol	47.95	54.57
CDX70122	Canola	cytosol	51.47	54.45
CDX98871	Canola	cytosol	51.47	54.45
CDY00732	Canola	cytosol	45.6	54.19
CDY01012	Canola	plastid	50.49	53.97
KRH63625	Soybean	nucleus	53.03	52.83
Bra034849.1-P	Field mustard	plastid	50.88	52.31
Bra009140.1-P	Field mustard	cytosol	51.47	52.18
CDY08535	Canola	plastid	50.68	52.11
KRH57134	Soybean	plastid	52.05	52.05
Bra001399.1-P	Field mustard	plastid	49.9	51.2
AT3G11330.1	Thale cress	plastid	49.9	51.1
AT5G05850.1	Thale cress	plastid	50.49	50.99
Solyc03g112270.2.1	Tomato	cytosol, nucleus, plastid	52.25	50.76
PGSC0003DMT400046655	Potato	cytosol	52.05	50.57
KRH74520	Soybean	cytosol	45.01	49.89
AT1G12970.1	Thale cress	cytosol	41.88	46.12
CDY26604	Canola	cytosol	41.29	45.57
CDY16042	Canola	cytosol	41.29	45.57
Bra026944.1-P	Field mustard	cytosol	41.29	45.57
Bra032935.1-P	Field mustard	plastid	39.53	45.29
CDY69629	Canola	cytosol	29.55	44.41
CDY48988	Canola	cytosol	40.7	43.97
AT3G26500.1	Thale cress	cytosol	39.92	43.31
KXG27059	Sorghum	cytosol, nucleus, plastid	22.7	31.96
EER95291	Sorghum	cytosol	13.31	25.95
EER94139	Sorghum	cytosol	18.0	24.6
KXG38871	Sorghum	cytosol	24.66	23.42
EES14257	Sorghum	nucleus	26.22	23.18
EES07794	Sorghum	cytosol	18.59	16.21

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:8073585	UniProt:C5YAQ1	ncoils:Coil	EnsemblPlants:EES10994
ProteinID:EES10994	ProteinID:EES10994.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF13855	PFscan:PS51450
PANTHER:PTHR44373	PANTHER:PTHR44373:SF2	SMART:SM00364	SMART:SM00369	EnsemblPlantsGene:SORBI_3006G119800	SUPFAM:SSF52058
UniParc:UPI0001A86F51	RefSeq:XP_002446666.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:48662914..48666360

Molecular Weight (calculated)

55697.2 Da

IEP (calculated)

4.733

GRAVY (calculated)

-0.253

Length

511 amino acids

Sequence
(BLAST)

001: MDPAPQTHPI LSYVLSRIPT LAKPNKAPTT SEFDIEQPPP VHTPSPRTAP SSPSAGEFEL VERMPGLRHP SVLRAMTRAV ADVSAARAAL QVLGPRPDHE
101: LVDSSRAIVA AAEAGDARIP EGDAEACRAV VRLEQTHDAY EALLHEAEAR LEKVYRSAME GTDLDDDDEA AAESGKGKAP AAGPEGGDAA VQEEVVAVLK
201: QAEDGKPVES VRLVDRQLRQ LPEAFGRILG LRVLDVSRNQ LEVIPDAIGG LDHLEELRLA ANSLVSLPDT IGLLSKLKIL NVSSNRLRAL PDSISKCRSL
301: VELDVSYNGL TYLPTNIGYE LVNLRKLWIH MNKLRSLPSS VCEMTSLYLL DAHFNELCGL PSAFGKLSSL EILNLSSNFS DLKELPSSFG DLLNLRELDL
401: SNNQIHALPD TFGRLDKLEK LNLEQNPLAM PPEAIVNNGV DAVKEYMSKR WLDILLEEEQ RRIAAETPQA SSTPKAWLDR SVSWVTGVSG SLVGYLGGNK
501: SDKDAYLDQQ F

Best Arabidopsis Sequence Match ( AT3G11330.1 )
(BLAST)

001: MAAEPNPKNF PVLSYVLARL PSFTAKSPSS SVPPFDIEQP PPSSSSSSIE IVTQMPHLTQ PDVLASMTSA ISDVAETRSI LRTLGPRPDH ESVDKARAKL
101: SEIESFLSES FEDIALTDAA AKDEKRRQEM DQEKTWCESI LKLDEVHASY EKLLKEAEER LVRIYESAEK NAAEDEENVA AVEVNEEVVG ILQHASANPV
201: DRVDLSGRKL RLLPEAFGRI QGLLVLNLSN NKLESIPDSI AGLHSLVELD VSTNSLETLP DSIGLLSKLK ILNVSTNKLT SLPDSICRCG SLVILDVSFN
301: RLTYLPTNIG PELVNLEKLL VQYNKIRSFP TSIGEMRSLK HLDAHFNELN GLPDSFVLLT NLEYLNLSSN FSDLKDLPFS FGELISLQEL DLSNNQIHAL
401: PDTFGTLDSL TKLNVDQNPL VVPPEEVVKE GVEAVKTYMG QRRISMLEEE EKKKMEEEME QANAGWLTRT TSKLKTYVAD VSEYLGSNSP RDPYLERQL

Arabidopsis Description

PIRL9Plant intracellular Ras-group-related LRR protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.