Factsheet for GSMUA_Achr1P13500_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	80.78	78.84
VIT_17s0000g09230.t01	Wine grape	cytosol	60.74	66.15
CDX70122	Canola	cytosol	60.33	61.08
CDX98871	Canola	cytosol	60.33	61.08
CDY00732	Canola	cytosol	53.37	60.7
CDX73881	Canola	cytosol	52.76	60.0
KRH63625	Soybean	nucleus	61.96	59.06
AT5G05850.1	Thale cress	plastid	60.94	58.89
Bra009140.1-P	Field mustard	cytosol	60.53	58.73
KRH74520	Soybean	cytosol	55.01	58.35
KRH57134	Soybean	plastid	60.94	58.32
Solyc03g112270.2.1	Tomato	cytosol, nucleus, plastid	61.96	57.6
Zm00001d025681_P001	Maize	plasma membrane	58.9	57.37
AT3G11330.1	Thale cress	plastid	58.28	57.11
TraesCS2D01G335800.1	Wheat	cytosol, plastid	58.49	56.97
PGSC0003DMT400046655	Potato	cytosol	61.15	56.84
TraesCS2B01G354900.1	Wheat	plastid	58.08	56.57
CDY01012	Canola	plastid	55.21	56.49
TraesCS2A01G327100.1	Wheat	cytosol, plastid	58.08	56.46
Bra034849.1-P	Field mustard	plastid	57.26	56.34
EES10994	Sorghum	plastid	58.69	56.16
Bra001399.1-P	Field mustard	plastid	56.85	55.82
TraesCS6D01G191800.1	Wheat	plastid	55.83	55.38
CDY08535	Canola	plastid	56.24	55.33
Os02t0593600-01	Rice	plasma membrane	56.65	55.29
HORVU7Hr1G066320.3	Barley	cytosol	31.29	54.64
EES05350	Sorghum	plastid	55.01	53.48
HORVU6Hr1G053210.1	Barley	cytosol, plastid	55.42	52.52
AT1G12970.1	Thale cress	cytosol	49.69	52.37
HORVU2Hr1G082540.6	Barley	cytosol, mitochondrion	43.15	51.46
CDY16042	Canola	cytosol	48.67	51.4
Bra026944.1-P	Field mustard	cytosol	48.67	51.4
CDY26604	Canola	cytosol	48.67	51.4
Zm00001d017071_P002	Maize	plastid	55.42	51.23
Bra032935.1-P	Field mustard	plastid	45.81	50.22
CDY48988	Canola	cytosol	47.24	48.84
AT3G26500.1	Thale cress	cytosol	47.03	48.83
CDY69629	Canola	cytosol	33.74	48.53
GSMUA_Achr1P23570_001	Banana	nucleus	25.77	36.73
GSMUA_AchrUn_...	Banana	nucleus	25.15	36.18
GSMUA_Achr4P03290_001	Banana	cytosol	9.61	34.31
GSMUA_Achr4P19230_001	Banana	cytosol	28.02	26.3
GSMUA_Achr4P21530_001	Banana	cytosol	27.4	25.24
GSMUA_Achr5P23850_001	Banana	cytosol	27.4	24.32
GSMUA_Achr8P25490_001	Banana	nucleus	26.99	23.87
GSMUA_Achr4P03280_001	Banana	plastid	6.95	23.78
GSMUA_Achr5P07410_001	Banana	cytosol	16.56	21.32
GSMUA_Achr4P04360_001	Banana	cytosol	21.68	18.12
GSMUA_Achr6P03430_001	Banana	nucleus	15.54	16.1

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr1G13500_001
EnsemblPlants:GSMUA_Achr1P13500_001	EnsemblPlants:GSMUA_Achr1T13500_001	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0RZK8	PFAM:PF00560	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450
PANTHER:PTHR44373	PANTHER:PTHR44373:SF2	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0002959936
SEG:seg	:	:	:	:	:

Description

Putative Protein lap1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G13500_001]

Coordinates

chr1:-:10304395..10308129

Molecular Weight (calculated)

53960.7 Da

IEP (calculated)

4.596

GRAVY (calculated)

-0.165

Length

489 amino acids

Sequence
(BLAST)

001: MDPNPKSFPI LSYVMSRLPR IASFKAGQTH IGDHDIEQPP HVDVDVELVG RMPRLQHPAL LASMATVIAD VAQTRSVLGV LGDRPDHEAV DAARARIAEI
101: DADLSQQLGE IVALRAVVQL DEMHEAYEKF LRGAEERLVK MYGSAAEGSE AVGVREGPAV VQEEGEGVNE EVIRILQEGS GNCLERVDLS GRQLLYLPEA
201: FGKLRGLVSL NLSNNQLEAI PDAISGLECL EELRLSSNSL LSLPDSIGLL MNLKILDVSG NKLKSLPDSI SKCRSLVEFD ASYNELTYLP TNIGFELQNL
301: EKLWIHLNKI RSLPTSVCEM RSLRLLDAHF NELRGLPYAI GKLTNLEILN LSSNFSDLQE LPATFGDLIS LRELDLSNNQ IHALPDTFGR LDKLTKLNLD
401: QNPLVIPPSE VVTQGVEAVK DYMAKRWLDI LLEEERKSMA EETSPAQVGW LTRSTSWLTN WVSGVSGGVA EHLGAGQKPS RDPYLDQQL

Best Arabidopsis Sequence Match ( AT5G05850.1 )
(BLAST)

001: MATELNPKNF PVLSYVLDRL PSFTAKSSSS SDVEPPPSKS DPSSSSNHSI EIVTQMPHLA HPDVLASMTN ATADVSQTRS VLRTLGPRPD HETVDRARAR
101: LREIDASLSE SFEEIALSPN DIDVAEKEQK RREAVEQEKI WYKSILKLNE LHESYEKLLK EAEERLVRIY ESAEKNAAAV AEEEAAEVEV NEEVVSILQQ
201: AAENPLDRVD LSGRKLKLLP EAFGKIQGLL VLNLYNNQLQ AIPDSIAGLH NLLELDVSTN FLETLPDSIG LLSKLKILNV SCNKLTTLPD SICHCGSLVV
301: LDASYNNLTY LPTNIGFELV KLEKLLIHLN KIRSLPTSIG EMRSLRYLDA HFNELNGLPN SFGLLTNLEY LNLSSNFSDL QDLPASFGDL ISLQELDLSN
401: NQIHSLPDAF GTLVNLTKLN LDQNPLVVPP DEVVKQGVDA VKMYMGKRWV SMLEEEEKMA NMKDEMDQTN TDWLTRTTSK LKTYVTEVSE YLGSNPPRDP
501: YLDQQL

Arabidopsis Description

PIRL1Plant intracellular Ras-group-related LRR protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFJ3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.