Factsheet for Bra032935.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48988	Canola	cytosol	99.78	94.08
AT3G26500.1	Thale cress	cytosol	81.84	77.49
Bra026944.1-P	Field mustard	cytosol	62.78	60.48
KRH74520	Soybean	cytosol	51.57	49.89
HORVU7Hr1G066320.3	Barley	cytosol	29.37	46.79
GSMUA_Achr1P13500_001	Banana	plastid	50.22	45.81
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	48.43	43.11
HORVU2Hr1G082540.6	Barley	cytosol, mitochondrion	38.79	42.2
Bra034849.1-P	Field mustard	plastid	46.86	42.05
Bra009140.1-P	Field mustard	cytosol	47.31	41.87
Bra001399.1-P	Field mustard	plastid	45.07	40.36
TraesCS2B01G354900.1	Wheat	plastid	45.29	40.24
TraesCS2A01G327100.1	Wheat	cytosol, plastid	45.29	40.16
TraesCS2D01G335800.1	Wheat	cytosol, plastid	45.07	40.04
Zm00001d025681_P001	Maize	plasma membrane	44.84	39.84
EES10994	Sorghum	plastid	45.29	39.53
TraesCS6D01G191800.1	Wheat	plastid	42.83	38.74
EES05350	Sorghum	plastid	42.6	37.77
Os02t0593600-01	Rice	plasma membrane	42.15	37.52
HORVU6Hr1G053210.1	Barley	cytosol, plastid	42.15	36.43
Zm00001d017071_P002	Maize	plastid	43.05	36.29
Bra024119.1-P	Field mustard	cytosol	25.34	30.87
Bra038857.1-P	Field mustard	nucleus, plastid	26.23	30.47
Bra019126.1-P	Field mustard	cytosol, plastid	25.34	28.61
Bra013944.1-P	Field mustard	cytosol, plastid	24.89	27.89
Bra034850.1-P	Field mustard	nucleus	3.81	26.98
Bra011617.1-P	Field mustard	cytosol	26.46	25.82
Bra028680.1-P	Field mustard	cytosol	15.25	25.76
Bra005960.1-P	Field mustard	cytosol, mitochondrion, nucleus	14.57	24.81
Bra024514.1-P	Field mustard	cytosol	27.58	24.6
Bra037271.1-P	Field mustard	cytosol	28.25	24.47
Bra017712.1-P	Field mustard	nucleus	27.8	22.75
Bra021606.1-P	Field mustard	cytosol	15.47	19.01
Bra027245.1-P	Field mustard	nucleus	20.85	15.9

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EnsemblPlantsGene:Bra032935	EnsemblPlants:Bra032935.1	EnsemblPlants:Bra032935.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M4EVV2	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450
PANTHER:PTHR44373	PANTHER:PTHR44373:SF1	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0002545997
SEG:seg	:	:	:	:	:

Description

AT3G26500 (E=2e-189) | leucine-rich repeat family protein

Coordinates

chrA02:+:22428981..22430572

Molecular Weight (calculated)

49263.1 Da

IEP (calculated)

4.641

GRAVY (calculated)

-0.199

Length

446 amino acids

Sequence
(BLAST)

001: MAVQQTLAPS FPLLSDPQIM YSLTQSIPTT ITQTLTVLAS LGPRPDPSAV SSARSMIAEI LQMDSLSPEE AAKEAEIYAG AVRLEEVYDS YEKELSDLEE
101: KLSRVYATEA ESLLRSREEM NEEVVKVLKA AESGKVLERV DLSGQELKLL PEAICKIVGL VSLNISGNNL TFIPDAISKL KKLQELDVSS NSLESLPDSI
201: GMLLNLRILN VSANNLTSLP ESIAHCRSLV ELDASYNNLT SLPTNIGYGL QNLERLLIHL NKLRYFPGSI SEMISLKYLD AHMNEIHGLP SSMGRLKKLE
301: VLNLSSNFNN LMRVPDAITD LINLRELDLS NNQIQAIPDS FYMLKKLEKL NLDHNPLEIP SQEVAKQGAE AVREFMRKRW DMIMGEEQQR IGVEAERHGD
401: GTGWVSWGTS MVTNLVSGVS QTVGFGGGPG DGGDKKPGES HFYYQI

Best Arabidopsis Sequence Match ( AT3G26500.1 )
(BLAST)

001: MDHDLDKFPL LSYVLHQHDS NLHAPPSMAA QETLLPSFPL LSNPEIMSML TQSIPTTITQ TLFVFNSLGS RPDPLAVSSA RFKIAQIMDS LSPEEAAKES
101: EIYAGVVRLD EVHDSYEKKL KDTEEELSRV YSTEVESMLR SGEEVNEKVL AVLKEAESGG TVERIDLSSQ ELKLIPEAFW KVVGLVYLNL SGNDLTFIPD
201: AISKLKKLEE LDVSSNSLES LPDSIGMLLN LRILNVNANN LTALPESIAH CRSLVELDAS YNNLTSLPTN IGYGLQNLER LSIQLNKLRY FPGSISEMYN
301: LKYLDAHMNE IHGIPNSIGR LTKLEVLNLS SNFNNLMGVP DTITDLTNLR ELDLSNNQIQ AIPDSFYRLR KLEKLNLDQN PLEIPSQEVA TQGAEVVREF
401: MRKRWGDIMA EQQQRIGVEA ERHGDENGWV YWGTSMVTNL VSGVTHTIGF GGATSDGGDK KPGDSYFYHQ I

Arabidopsis Description

PIRL2Plant intracellular Ras-group-related LRR protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRV8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.