CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032935.1-P	Field mustard	plastid	94.08	99.78
CDY69629	Canola	cytosol	69.13	96.18
AT3G26500.1	Thale cress	cytosol	81.82	82.17
CDY26604	Canola	cytosol	63.21	64.58
CDY16042	Canola	cytosol	62.37	63.71
KRH74520	Soybean	cytosol	50.53	51.84
GSMUA_Achr1P13500_001	Banana	plastid	48.84	47.24
CDY00732	Canola	cytosol	42.49	46.74
CDX73881	Canola	cytosol	42.28	46.51
HORVU7Hr1G066320.3	Barley	cytosol	27.48	46.43
CDX70122	Canola	cytosol	46.51	45.55
CDX98871	Canola	cytosol	46.51	45.55
CDY01012	Canola	plastid	45.67	45.19
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	46.93	44.31
CDY08535	Canola	plastid	45.88	43.66
HORVU2Hr1G082540.6	Barley	cytosol, mitochondrion	36.36	41.95
TraesCS2B01G354900.1	Wheat	plastid	43.97	41.43
TraesCS2A01G327100.1	Wheat	cytosol, plastid	43.97	41.35
TraesCS2D01G335800.1	Wheat	cytosol, plastid	43.76	41.24
Zm00001d025681_P001	Maize	plasma membrane	43.55	41.04
EES10994	Sorghum	plastid	43.97	40.7
TraesCS6D01G191800.1	Wheat	plastid	41.65	39.96
EES05350	Sorghum	plastid	41.65	39.16
Os02t0593600-01	Rice	plasma membrane	40.8	38.52
HORVU6Hr1G053210.1	Barley	cytosol, plastid	41.01	37.6
Zm00001d017071_P002	Maize	plastid	41.65	37.24
CDY30187	Canola	nucleus	21.35	36.2
CDY46713	Canola	nucleus	24.31	31.42
CDY39144	Canola	nucleus, plastid	25.16	30.99
CDX82667	Canola	nucleus, plastid	25.16	30.99
CDY42760	Canola	cytosol, plastid	24.31	29.11
CDX89369	Canola	cytosol, plastid	23.89	28.39
CDX72539	Canola	nucleus	23.47	28.24
CDX94383	Canola	cytosol	23.47	27.89
CDX92748	Canola	cytosol, plasma membrane, plastid	21.99	27.81
CDY14024	Canola	mitochondrion	14.8	26.62
CDY40770	Canola	cytosol	14.59	26.14
CDX81078	Canola	mitochondrion	14.16	25.57
CDY07843	Canola	nucleus	26.64	25.2
CDX78316	Canola	cytosol, mitochondrion, nucleus	13.95	25.19
CDY30364	Canola	cytosol	26.85	24.85
CDY66405	Canola	cytosol	26.22	24.8
CDX69142	Canola	cytosol	28.12	24.45
CDX75505	Canola	cytosol	27.7	24.26
CDY26809	Canola	nucleus	26.64	23.6
CDY40632	Canola	nucleus	26.85	23.3
CDX97851	Canola	cytosol	14.8	19.28
CDY29703	Canola	cytosol	14.59	19.01
CDX97667	Canola	nucleus	19.87	16.07
CDY56828	Canola	nucleus	19.45	15.73

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A078IIR2	EnsemblPlants:CDY48988	ProteinID:CDY48988	ProteinID:CDY48988.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00092189001	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF13855	PRINTS:PR00019
PFscan:PS51450	PANTHER:PTHR44373	PANTHER:PTHR44373:SF1	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058
UniParc:UPI0004EE44B6	SEG:seg	:	:	:	:

Description

BnaA02g28080DBnaA02g28080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IIR2]

Coordinates

chrLK032805:+:73080..74884

Molecular Weight (calculated)

52478.9 Da

IEP (calculated)

4.761

GRAVY (calculated)

-0.229

Length

473 amino acids

Sequence
(BLAST)

001: MEHDLDKFPL LSYVLHQYDS KHHAPPSMAV QQTLAPSFPL LSDPQIMYSL TQSIPTTITQ TLTVLASLGP RPDPSAVSSA RSMIAEILQM DSLSPEEAAK
101: EAEIYAGAVR LEEVYDSYEK ELSDLEEKLS RVYATEAESL LRSREEMNEE VVKVLKAAES GKVLERVDLS GQELKLLPEA ICKIVGLVSL NISGNNLTFI
201: PDAISKLKKL QELDVSSNSL ESLPDSIGML LNLRILNVSA NNLTSLPESI AHCRSLVELD ASYNNLTSLP TNIGYGLQNL ERLLIHLNKL RYFPGSISEM
301: ISLKYLDAHM NEIHGLPSSM GRLKKLEVLN LSSNFNNLMR VPDAITDLIN LRELDLSNNQ IQVIPDSFYM LKKLEKLNLD HNPLEIPSQE VAKQGAEAVR
401: EFMRKRWDMI MGEEQQRIGV EAERHGDGTG WVSWGTSMVT NLVSGVSQTV GFGGGPGDGG DKKPGESHFY YQI

Best Arabidopsis Sequence Match ( AT3G26500.1 )
(BLAST)

001: MDHDLDKFPL LSYVLHQHDS NLHAPPSMAA QETLLPSFPL LSNPEIMSML TQSIPTTITQ TLFVFNSLGS RPDPLAVSSA RFKIAQIMDS LSPEEAAKES
101: EIYAGVVRLD EVHDSYEKKL KDTEEELSRV YSTEVESMLR SGEEVNEKVL AVLKEAESGG TVERIDLSSQ ELKLIPEAFW KVVGLVYLNL SGNDLTFIPD
201: AISKLKKLEE LDVSSNSLES LPDSIGMLLN LRILNVNANN LTALPESIAH CRSLVELDAS YNNLTSLPTN IGYGLQNLER LSIQLNKLRY FPGSISEMYN
301: LKYLDAHMNE IHGIPNSIGR LTKLEVLNLS SNFNNLMGVP DTITDLTNLR ELDLSNNQIQ AIPDSFYRLR KLEKLNLDQN PLEIPSQEVA TQGAEVVREF
401: MRKRWGDIMA EQQQRIGVEA ERHGDENGWV YWGTSMVTNL VSGVTHTIGF GGATSDGGDK KPGDSYFYHQ I

Arabidopsis Description

PIRL2Plant intracellular Ras-group-related LRR protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRV8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.