CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48988	Canola	cytosol	96.18	69.13
AT3G26500.1	Thale cress	cytosol	82.65	59.66
CDY26604	Canola	cytosol	66.76	49.03
CDY16042	Canola	cytosol	65.59	48.16
KRH74520	Soybean	cytosol	51.47	37.96
CDY00732	Canola	cytosol	45.0	35.58
CDX73881	Canola	cytosol	44.71	35.35
CDY01012	Canola	plastid	48.82	34.73
CDX70122	Canola	cytosol	48.24	33.95
CDX98871	Canola	cytosol	48.24	33.95
GSMUA_Achr1P13500_001	Banana	plastid	48.53	33.74
CDY08535	Canola	plastid	48.82	33.4
HORVU7Hr1G066320.3	Barley	cytosol	26.18	31.79
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	46.76	31.74
TraesCS2B01G354900.1	Wheat	plastid	44.41	30.08
Zm00001d025681_P001	Maize	plasma membrane	44.12	29.88
TraesCS2A01G327100.1	Wheat	cytosol, plastid	44.12	29.82
TraesCS2D01G335800.1	Wheat	cytosol, plastid	43.82	29.68
TraesCS6D01G191800.1	Wheat	plastid	42.94	29.61
EES10994	Sorghum	plastid	44.41	29.55
EES05350	Sorghum	plastid	43.24	29.22
Os02t0593600-01	Rice	plasma membrane	42.65	28.94
HORVU6Hr1G053210.1	Barley	cytosol, plastid	43.24	28.49
CDY30187	Canola	nucleus	23.24	28.32
HORVU2Hr1G082540.6	Barley	cytosol, mitochondrion	33.24	27.56
Zm00001d017071_P002	Maize	plastid	42.65	27.41
CDX82667	Canola	nucleus, plastid	25.29	22.4
CDY39144	Canola	nucleus, plastid	25.29	22.4
CDY46713	Canola	nucleus	23.24	21.58
CDY14024	Canola	mitochondrion	16.47	21.29
CDY40770	Canola	cytosol	16.18	20.83
CDY42760	Canola	cytosol, plastid	23.82	20.51
CDX81078	Canola	mitochondrion	15.59	20.23
CDX89369	Canola	cytosol, plastid	23.53	20.1
CDX72539	Canola	nucleus	22.94	19.85
CDX78316	Canola	cytosol, mitochondrion, nucleus	15.29	19.85
CDX94383	Canola	cytosol	22.94	19.6
CDY07843	Canola	nucleus	27.94	19.0
CDY66405	Canola	cytosol	27.65	18.8
CDX92748	Canola	cytosol, plasma membrane, plastid	20.59	18.72
CDY30364	Canola	cytosol	27.65	18.4
CDX75505	Canola	cytosol	28.24	17.78
CDX69142	Canola	cytosol	28.24	17.65
CDY26809	Canola	nucleus	27.65	17.6
CDY40632	Canola	nucleus	27.65	17.25
CDX97851	Canola	cytosol	15.59	14.6
CDY29703	Canola	cytosol	15.29	14.33
CDX97667	Canola	nucleus	20.0	11.62
CDY56828	Canola	nucleus	19.41	11.28

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A078JS21	EnsemblPlants:CDY69629	ProteinID:CDY69629	ProteinID:CDY69629.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00089540001	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF13855
PFscan:PS51450	PANTHER:PTHR44373	PANTHER:PTHR44373:SF1	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058
UniParc:UPI0004EDE8C3	:	:	:	:	:

Description

BnaCnng64530DBnaCnng64530D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JS21]

Coordinates

chrLK039898:-:105..1403

Molecular Weight (calculated)

37569.2 Da

IEP (calculated)

4.812

GRAVY (calculated)

-0.105

Length

340 amino acids

Sequence
(BLAST)

001: MEHDLDKFPL LSYVLHQYDS NHHAPPSTAV QQTLAPSFPL LSDPQIMSSL TQSIPTTITQ TLTVLASLGP RPDPSAVSSA RSKIAQILQM DSLSPEEAAK
101: EAEIYAGAVR LEEVYDSYEK ELNDLEEKLS RVYATEVESL LRSREEMNVE VVKVLKAAES GKVLERVDLS GQELKLLPEA ICKIVGLVSL NISGNNLMFI
201: PDAFSKLKKL QELDVSSNSL ESLPDSIGML LNLRILNVSA NNLTSLPESI AHCRSLVELD ASYNNLTSLP TNIGYGLQNL ERLSIQLNKL RYFPGSISEM
301: ISLKYLDAHM NEIHGLPSSM GRLKKLEVLN LSSNFNNLMC

Best Arabidopsis Sequence Match ( AT3G26500.1 )
(BLAST)

001: MDHDLDKFPL LSYVLHQHDS NLHAPPSMAA QETLLPSFPL LSNPEIMSML TQSIPTTITQ TLFVFNSLGS RPDPLAVSSA RFKIAQIMDS LSPEEAAKES
101: EIYAGVVRLD EVHDSYEKKL KDTEEELSRV YSTEVESMLR SGEEVNEKVL AVLKEAESGG TVERIDLSSQ ELKLIPEAFW KVVGLVYLNL SGNDLTFIPD
201: AISKLKKLEE LDVSSNSLES LPDSIGMLLN LRILNVNANN LTALPESIAH CRSLVELDAS YNNLTSLPTN IGYGLQNLER LSIQLNKLRY FPGSISEMYN
301: LKYLDAHMNE IHGIPNSIGR LTKLEVLNLS SNFNNLMGVP DTITDLTNLR ELDLSNNQIQ AIPDSFYRLR KLEKLNLDQN PLEIPSQEVA TQGAEVVREF
401: MRKRWGDIMA EQQQRIGVEA ERHGDENGWV YWGTSMVTNL VSGVTHTIGF GGATSDGGDK KPGDSYFYHQ I

Arabidopsis Description

PIRL2Plant intracellular Ras-group-related LRR protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRV8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.