CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013944.1-P	Field mustard	cytosol, plastid	99.25	99.25
CDX94383	Canola	cytosol	97.99	97.99
CDY42760	Canola	cytosol, plastid	89.95	90.63
AT4G26050.1	Thale cress	cytosol	84.67	87.99
CDX92748	Canola	cytosol, plasma membrane, plastid	80.65	85.83
VIT_11s0052g00390.t01	Wine grape	cytosol	54.77	70.78
KRH02753	Soybean	cytosol	56.03	61.94
CDY30187	Canola	nucleus	42.71	60.93
KRH37361	Soybean	cytosol	54.02	60.56
PGSC0003DMT400016538	Potato	mitochondrion	55.03	60.33
GSMUA_Achr1P23570_001	Banana	nucleus	51.26	59.48
GSMUA_AchrUn_...	Banana	nucleus	50.75	59.41
Solyc12g017480.1.1	Tomato	cytosol	53.77	58.79
KRH12356	Soybean	cytosol	52.76	57.85
CDY46713	Canola	nucleus	52.51	57.1
CDX82667	Canola	nucleus, plastid	54.27	56.25
CDY39144	Canola	nucleus, plastid	54.27	56.25
Os04t0605300-01	Rice	nucleus	48.99	55.4
TraesCS2D01G430800.1	Wheat	cytosol, nucleus, plastid	49.75	54.7
TraesCS2B01G454100.1	Wheat	cytosol, nucleus, plastid	49.5	54.42
TraesCS2A01G432800.1	Wheat	cytosol, nucleus, plastid	49.75	54.25
Zm00001d002399_P001	Maize	nucleus	33.67	53.39
KXG27059	Sorghum	cytosol, nucleus, plastid	48.24	52.89
Zm00001d002402_P001	Maize	cytosol, nucleus, plastid	48.24	52.89
HORVU2Hr1G101090.6	Barley	plastid	50.75	47.87
CDX73881	Canola	cytosol	32.66	30.23
CDY00732	Canola	cytosol	32.16	29.77
CDX72539	Canola	nucleus	27.14	27.48
CDX70122	Canola	cytosol	33.17	27.33
CDX98871	Canola	cytosol	33.17	27.33
CDY01012	Canola	plastid	32.66	27.2
CDY08535	Canola	plastid	32.66	26.16
CDY26604	Canola	cytosol	29.65	25.49
CDY16042	Canola	cytosol	29.4	25.27
CDX81078	Canola	mitochondrion	15.83	24.05
CDY48988	Canola	cytosol	28.39	23.89
CDY40770	Canola	cytosol	15.83	23.86
CDX78316	Canola	cytosol, mitochondrion, nucleus	15.58	23.66
CDY14024	Canola	mitochondrion	15.58	23.57
CDY69629	Canola	cytosol	20.1	23.53
CDY66405	Canola	cytosol	27.14	21.6
CDY07843	Canola	nucleus	26.63	21.2
CDX69142	Canola	cytosol	28.89	21.14
CDX75505	Canola	cytosol	28.14	20.74
CDY30364	Canola	cytosol	25.63	19.96
CDY40632	Canola	nucleus	26.88	19.63
CDY26809	Canola	nucleus	25.63	19.1
CDY29703	Canola	cytosol	15.08	16.53
CDX97851	Canola	cytosol	14.82	16.25
CDX97667	Canola	nucleus	23.87	16.24
CDY56828	Canola	nucleus	23.12	15.73

Protein Annotations

EnsemblPlants:CDX89369	EnsemblPlantsGene:GSBRNA2T00149598001	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PANTHER:PTHR44997
PFAM:PF13855	PFscan:PS51450	ProteinID:CDX89369	ProteinID:CDX89369.1	SEG:seg	SMART:SM00364
SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0004EE4D70	MapMan:35.1	:	:

Description

BnaA01g15240D

Coordinates

chrLK031858:-:1153005..1158615

Molecular Weight (calculated)

43654.8 Da

IEP (calculated)

10.024

GRAVY (calculated)

-0.265

Length

398 amino acids

Sequence
(BLAST)

001: MMGYEHMNQM TMTTTGMMKN FNKVGPINIP RKKTTRRSVS AIDGGAAATA AAAGEGDRPQ DLKTLDLSGM SLASLSASSI NLASISKLDL SNNNIQQIPE
101: SLVARMLNLW TLDLHSNQLK TLPNSIGCLS KLKVLNVSGN NLKALPKTIE DCRSLEELNA NFNELTTLPD TIGFELTNLT KLSVNSNKLI VLPSSLGHLT
201: SLRVLDARLN HLGSLPEDLE NLVNLQVLNV SQNFQHLKTL PYSVGLLISL VELDVSYNGI KVLPDSIGCL RKIQKLSVEG NPLVSPPFEV VENGLEAVKQ
301: YMSEKMTESN KKTPTKKKFW GIGKMVKFKT FHGLSSSPGR SPGRRTGGDS HGDEREGFIN VSDYRQIDGI ASPRHVSLFN PRRLLSPLSA YFSPPRYR

Best Arabidopsis Sequence Match ( AT4G26050.1 )
(BLAST)

001: MMGYEQMNQM TMTTTAMMKN YNKKGLINTP QKKMTRRSVS AIDGGAAATA KEGDRRQNIK TLDLSGMSLA SLSASSINLA SISKLDLSNN NIQKIPESLV
101: ARMLNLWALD LQSNQLKTLP NSIGCLSKLK FLNVSGNYLQ SLPKTIEDCR SLEELNANFN ELTRLPDAIG FELTNLTKLS VNSNKLVLLP NSVSYLTSLR
201: VLDARLNRLS SLPEDLENLV NLQVLNVSQN FQHLTTLPYS VGLLISLVEL DVSYNGITVL PDSLGCLRRI QKLSVEGNPL ISPPFEVVEQ GLEALKQYMS
301: EKMTESYKKT PTKKKSWGIG KLVKYGLSSS PGRSTGREDG KEGFINVSDY RQIDGIASPR HVSLFNPRRL LSPLSAYFSP PRY

Arabidopsis Description

PIRL8Plant intracellular Ras-group-related LRR protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWE5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.