Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- extracellular 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002402_P001 | Maize | cytosol, nucleus, plastid | 95.59 | 95.59 |
| Zm00001d002399_P001 | Maize | nucleus | 61.16 | 88.45 |
| Os04t0605300-01 | Rice | nucleus | 79.06 | 81.53 |
| TraesCS2A01G432800.1 | Wheat | cytosol, nucleus, plastid | 78.24 | 77.81 |
| TraesCS2D01G430800.1 | Wheat | cytosol, nucleus, plastid | 77.14 | 77.35 |
| TraesCS2B01G454100.1 | Wheat | cytosol, nucleus, plastid | 76.58 | 76.8 |
| HORVU2Hr1G101090.6 | Barley | plastid | 77.14 | 66.35 |
| VIT_11s0052g00390.t01 | Wine grape | cytosol | 54.82 | 64.61 |
| GSMUA_AchrUn_... | Banana | nucleus | 60.06 | 64.12 |
| GSMUA_Achr1P23570_001 | Banana | nucleus | 59.5 | 62.97 |
| KRH37361 | Soybean | cytosol | 56.47 | 57.75 |
| KRH02753 | Soybean | cytosol | 55.37 | 55.83 |
| KRH12356 | Soybean | cytosol | 55.65 | 55.65 |
| PGSC0003DMT400016538 | Potato | mitochondrion | 54.55 | 54.55 |
| Solyc12g017480.1.1 | Tomato | cytosol | 54.55 | 54.4 |
| CDY30187 | Canola | nucleus | 39.94 | 51.97 |
| Bra024119.1-P | Field mustard | cytosol | 51.79 | 51.37 |
| CDY39144 | Canola | nucleus, plastid | 53.72 | 50.78 |
| CDX82667 | Canola | nucleus, plastid | 53.72 | 50.78 |
| Bra038857.1-P | Field mustard | nucleus, plastid | 53.72 | 50.78 |
| CDY46713 | Canola | nucleus | 50.96 | 50.55 |
| CDY42760 | Canola | cytosol, plastid | 54.82 | 50.38 |
| Bra019126.1-P | Field mustard | cytosol, plastid | 54.82 | 50.38 |
| AT4G29880.1 | Thale cress | nucleus | 51.52 | 50.13 |
| AT4G26050.1 | Thale cress | cytosol | 52.89 | 50.13 |
| AT2G19330.1 | Thale cress | nucleus, plastid | 52.34 | 50.0 |
| CDX92748 | Canola | cytosol, plasma membrane, plastid | 50.14 | 48.66 |
| Bra013944.1-P | Field mustard | cytosol, plastid | 53.17 | 48.49 |
| CDX89369 | Canola | cytosol, plastid | 52.89 | 48.24 |
| CDX94383 | Canola | cytosol | 52.62 | 47.99 |
| EES05350 | Sorghum | plastid | 32.51 | 23.46 |
| EER95291 | Sorghum | cytosol | 16.53 | 22.9 |
| EES10994 | Sorghum | plastid | 31.96 | 22.7 |
| EES14257 | Sorghum | nucleus | 31.68 | 19.9 |
| KXG38871 | Sorghum | cytosol | 28.93 | 19.52 |
| EER94139 | Sorghum | cytosol | 16.8 | 16.31 |
| EES07794 | Sorghum | cytosol | 23.69 | 14.68 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:C5YFI7 | ProteinID:EES12808.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR032675 | EnsemblPlants:KXG27059 | ProteinID:KXG27059 | ProteinID:KXG27059.1 |
| InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF13855 | PRINTS:PR00019 | PFscan:PS51450 |
| PANTHER:PTHR44997 | SMART:SM00364 | SMART:SM00369 | EnsemblPlantsGene:SORBI_3006G206700 | SUPFAM:SSF52058 | unigene:Sbi.6383 |
| UniParc:UPI0001A874EA | RefSeq:XP_002448480.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:55621779..55625906
Molecular Weight (calculated)
39683.1 Da
IEP (calculated)
9.572
GRAVY (calculated)
-0.278
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDMGEKRRH GHGHGHGHGH GHLVGFGVGG VGHAEHEEKR MEQKKLDMSG MCMDTLPHLT TPLGNITTLD LSNNNLQSIP ESIIARLLNV VVLDVRSNQL
101: KSLPNSIGCL SKLKVLNVSG NLLQELPATI EECRALEELN ANFNQLTRLP DTLGFELHGL RRLSVNSNKL AYLPSSTSHM TALRSLDARL NCLRALPDGL
201: ENLGGLETLN VSQNFQYLRE LPYGIGLLVS LRELDVSYNS IAALPDSMGC LTKLARFSAA GNPLVCPPMD VVEQSLDAMR AYLSARMNGT AKAKKKSWVP
301: KLVKYSTFSA GMMTPGRTKN NSTDGLHMSD YQSLHGGGIA SPGFLSMLSP RRLFSPRRNS TKH
101: KSLPNSIGCL SKLKVLNVSG NLLQELPATI EECRALEELN ANFNQLTRLP DTLGFELHGL RRLSVNSNKL AYLPSSTSHM TALRSLDARL NCLRALPDGL
201: ENLGGLETLN VSQNFQYLRE LPYGIGLLVS LRELDVSYNS IAALPDSMGC LTKLARFSAA GNPLVCPPMD VVEQSLDAMR AYLSARMNGT AKAKKKSWVP
301: KLVKYSTFSA GMMTPGRTKN NSTDGLHMSD YQSLHGGGIA SPGFLSMLSP RRLFSPRRNS TKH
001: MICEEAYHQQ PQIQKEQMMT MDQRNNHQRK RSPLSSPSSP SSPSSPSSPK SPSFNNNEEE RLEVVNLSGM ALESLPNPSL NLAQICKLDL SNNHLQTIPE
101: SLTARLLNLI ALDVHSNQIK ALPNSIGCLS KLKTLNVSGN FLVSFPKSIQ HCRSLEELNA NFNKLIRLPD SIGFELTNLR KLSINSNKLI SLPISITHLT
201: SLRVLDARLN CLMILPDDLE NLINLEILNV SQNFQYLSAL PSSIGLLMNL IELDVSYNKI TVLPESIGCM RRLRKLSVEG NPLVSPPIEV MEQNLQVVRE
301: YLTQKMNGGS PRSPSKKKSW GFGKLVKYGT FNGGSRSWNR EEREGFIMPE YRSIDSLASP RYSGMFSPRR LFSPRTYFSR
101: SLTARLLNLI ALDVHSNQIK ALPNSIGCLS KLKTLNVSGN FLVSFPKSIQ HCRSLEELNA NFNKLIRLPD SIGFELTNLR KLSINSNKLI SLPISITHLT
201: SLRVLDARLN CLMILPDDLE NLINLEILNV SQNFQYLSAL PSSIGLLMNL IELDVSYNKI TVLPESIGCM RRLRKLSVEG NPLVSPPIEV MEQNLQVVRE
301: YLTQKMNGGS PRSPSKKKSW GFGKLVKYGT FNGGSRSWNR EEREGFIMPE YRSIDSLASP RYSGMFSPRR LFSPRTYFSR
Arabidopsis Description
PIRL6Plant intracellular Ras-group-related LRR protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O64566]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.